RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 SEPT11Q9NVA2 429 aaKnown RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 CTTNBP2NLQ9P2B4 639 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 DAGLAQ9Y4D2 1042 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 STK24Q9Y6E0 443 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 TCRBV7S2A1N4TA0A589 114 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 SLURP2P0DP57 97 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 PYGMP11217 842 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 ATP5DP30049 168 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 GCKP35557 465 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 LACTBP83111 547 aaPredicted RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 MKRN3Q13064 507 aaKnown RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 Q4G0T1 1027 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 RNF43Q68DV7 783 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 CAPRIN2Q6IMN6 1127 aaKnown RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 SLC13A5Q86YT5 568 aaPredicted RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 CCDC105Q8IYK2 499 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 RMDN2Q96LZ7 410 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 ANKRD27Q96NW4 1050 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 DDX4Q9NQI0 724 aaKnown RBP15.03■□□□□ -0
SCNN1A-201ENST00000228916 STK38LQ9Y2H1 464 aa15.03■□□□□ -0
SCNN1A-201ENST00000228916 UBAP1LF5GYI3 381 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 TULP1O00294 542 aaPredicted RBP15.02■□□□□ -0
SCNN1A-201ENST00000228916 COMTP21964 271 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 POLD1P28340 1107 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 ARHGAP4P98171 946 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 ATP11AP98196 1134 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 PRR16Q569H4 304 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 CGB2Q6NT52 195 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 ANKLE1Q8NAG6 615 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 MORC4Q8TE76 937 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 ZNF483Q8TF39 744 aaPredicted RBP15.02■□□□□ -0
SCNN1A-201ENST00000228916 CRAMP1Q96RY5 1269 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 WNT8AQ9H1J5 351 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 MTUS1Q9ULD2 1270 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 TRIM33Q9UPN9 1127 aa15.02■□□□□ -0
SCNN1A-201ENST00000228916 FAM170AA1A519 330 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 FOXN3O00409 490 aaPredicted RBP15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 MTA2O94776 668 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 EYA4O95677 639 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 FTLP02792 175 aaPredicted RBP15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 RFX1P22670 979 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 CALRP27797 417 aaKnown RBP15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 ICA1Q05084 483 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 MGAT5Q09328 741 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 CCDC15Q0P6D6 951 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 AP3B2Q13367 1082 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 MPP2Q14168 576 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 PHLDB3Q6NSJ2 640 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 MIGA2Q7L4E1 593 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 CCDC25Q86WR0 208 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 PTPN22Q9Y2R2 807 aa15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 AHDC1Q5TGY3 1603 aaPredicted RBP15.02□□□□□ -0.01
SCNN1A-201ENST00000228916 MEIS2O14770 477 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 ARHGAP44Q17R89 818 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 RHBDF2Q6PJF5 856 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 SLC20A1Q8WUM9 679 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 SLCO2A1Q92959 643 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 P2RX7Q99572 595 aaKnown RBP15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 DMAC2Q9NW81 257 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 WHRNQ9P202 907 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 UNC5CO95185 931 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 GPC5P78333 572 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 CALCOCO2Q13137 446 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 ACVR2BQ13705 512 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 LMO3Q8TAP4 145 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 C7orf43Q8WVR3 580 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 TRIM7Q9C029 511 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 LRRC19Q9H756 370 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 RABGAP1Q9Y3P9 1069 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 TMEM110-MUSTN1A8MSY1 372 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 LUC7L3O95232 432 aaKnown RBP15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 ACSL3O95573 720 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 GH1P01241 217 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 CDC25CP30307 473 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 NMT1P30419 496 aaKnown RBP15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 KCNJ1P48048 391 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 MYL7Q01449 175 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 QRICH1Q2TAL8 776 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 RINT1Q6NUQ1 792 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 ANKRD42Q8N9B4 389 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 CNBD1Q8NA66 436 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 MICAL1Q8TDZ2 1067 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 FAM20AQ96MK3 541 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 POLR3CQ9BUI4 534 aaPredicted RBP15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 PCDHA1Q9Y5I3 950 aa15.01□□□□□ -0.01
SCNN1A-201ENST00000228916 A6NHS1 94 aa15□□□□□ -0.01
SCNN1A-201ENST00000228916 SFI1A8K8P3 1242 aa15□□□□□ -0.01
SCNN1A-201ENST00000228916 LRRN2O75325 713 aa15□□□□□ -0.01
SCNN1A-201ENST00000228916 TCEA3O75764 348 aa15□□□□□ -0.01
SCNN1A-201ENST00000228916 ECEL1O95672 775 aa15□□□□□ -0.01
SCNN1A-201ENST00000228916 TRIM49P0CI25 452 aa15□□□□□ -0.01
SCNN1A-201ENST00000228916 TRIM49CP0CI26 452 aa15□□□□□ -0.01
SCNN1A-201ENST00000228916 ABL2P42684 1182 aa15□□□□□ -0.01
SCNN1A-201ENST00000228916 CYP4A11Q02928 519 aa15□□□□□ -0.01
SCNN1A-201ENST00000228916 COG2Q14746 738 aa15□□□□□ -0.01
SCNN1A-201ENST00000228916 SLF2Q8IX21 1173 aa15□□□□□ -0.01
SCNN1A-201ENST00000228916 UTP4Q969X6 686 aaKnown RBP15□□□□□ -0.01
SCNN1A-201ENST00000228916 MAGEB18Q96M61 343 aa15□□□□□ -0.01
SCNN1A-201ENST00000228916 TGS1Q96RS0 853 aaKnown RBP15□□□□□ -0.01
SCNN1A-201ENST00000228916 MLXIPLQ9NP71 852 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms