RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 TAS2R14Q9NYV8 317 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 STYXL1Q9Y6J8 313 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 OATP04181 439 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 UBA1P22314 1058 aaKnown RBP20.72■□□□□ 0.91
YBX3-201ENST00000228251 NOP2P46087 812 aaKnown RBP20.72■□□□□ 0.91
YBX3-201ENST00000228251 HADHBP55084 474 aaKnown RBP20.72■□□□□ 0.91
YBX3-201ENST00000228251 SP4Q02446 784 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 EMC2Q15006 297 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 KRT39Q6A163 491 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 CCDC70Q6NSX1 233 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 NT5DC3Q86UY8 548 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 PBKQ96KB5 322 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 ISCUQ9H1K1 167 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 STIM2Q9P246 746 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 NOCTQ9UK39 431 aaKnown RBP20.72■□□□□ 0.91
YBX3-201ENST00000228251 CSADQ9Y600 493 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 GSTTP1A0A1W2PQM5 241 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 ABCD1P33897 745 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 AARSP49588 968 aaKnown RBP eCLIP20.72■□□□□ 0.91
YBX3-201ENST00000228251 CLDN10P78369 228 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 C15orf39Q6ZRI6 1047 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 ACTRT1Q8TDG2 376 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 HELQQ8TDG4 1101 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 LMBR1Q8WVP7 490 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 HES6Q96HZ4 224 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 ZNF302Q9NR11 478 aa20.72■□□□□ 0.91
YBX3-201ENST00000228251 ANKRD62A6NC57 917 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 H0YCG3 227 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 SORBS3O60504 671 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 FARP2O94887 1054 aaPredicted RBP20.71■□□□□ 0.91
YBX3-201ENST00000228251 PIGRP01833 764 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 CHRNB2P17787 502 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 TNFAIP3P21580 790 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 ARL2P36404 184 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 MAP2K1Q02750 393 aaPredicted RBP20.71■□□□□ 0.91
YBX3-201ENST00000228251 TARBP2Q15633 366 aaKnown RBP20.71■□□□□ 0.91
YBX3-201ENST00000228251 MTERF2Q49AM1 385 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 SULF1Q8IWU6 871 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 GSPT2Q8IYD1 628 aaKnown RBP20.71■□□□□ 0.91
YBX3-201ENST00000228251 SYCE1Q8N0S2 351 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 GPD1LQ8N335 351 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 RASGEF1CQ8N431 466 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 SLC35G2Q8TBE7 412 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 EPS8L1Q8TE68 723 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 SCFD2Q8WU76 684 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 DCPSQ96C86 337 aaKnown RBP20.71■□□□□ 0.91
YBX3-201ENST00000228251 ARHGEF26Q96DR7 871 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 PORCNQ9H237 461 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 ZCCHC17Q9NP64 241 aaKnown RBP20.71■□□□□ 0.91
YBX3-201ENST00000228251 TOPORSQ9NS56 1045 aaPredicted RBP20.71■□□□□ 0.91
YBX3-201ENST00000228251 HPCAL4Q9UM19 191 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 KCNH4Q9UQ05 1017 aa20.71■□□□□ 0.91
YBX3-201ENST00000228251 SCP2P22307 547 aa20.7■□□□□ 0.9
YBX3-201ENST00000228251 MOGSQ13724 837 aa20.7■□□□□ 0.9
YBX3-201ENST00000228251 METTL13Q8N6R0 699 aa20.7■□□□□ 0.9
YBX3-201ENST00000228251 POMGNT1Q8WZA1 660 aa20.7■□□□□ 0.9
YBX3-201ENST00000228251 IFT74Q96LB3 600 aa20.7■□□□□ 0.9
YBX3-201ENST00000228251 FGD4Q96M96 766 aa20.7■□□□□ 0.9
YBX3-201ENST00000228251 POP1Q99575 1024 aaKnown RBP20.7■□□□□ 0.9
YBX3-201ENST00000228251 SELENOOQ9BVL4 669 aa20.7■□□□□ 0.9
YBX3-201ENST00000228251 R3HDMLQ9H3Y0 253 aa20.7■□□□□ 0.9
YBX3-201ENST00000228251 OSGEPQ9NPF4 335 aa20.7■□□□□ 0.9
YBX3-201ENST00000228251 GDF3Q9NR23 364 aa20.7■□□□□ 0.9
YBX3-201ENST00000228251 SPDYE5A6NIY4 337 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 BHMG1C9JSJ3 638 aaPredicted RBP20.69■□□□□ 0.9
YBX3-201ENST00000228251 CXCL11O14625 94 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 KCNK3O14649 394 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 BUB1BO60566 1050 aaPredicted RBP20.69■□□□□ 0.9
YBX3-201ENST00000228251 GLRA2P23416 452 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 MATR3P43243 847 aaKnown RBP eCLIP20.69■□□□□ 0.9
YBX3-201ENST00000228251 PRPF4BQ13523 1007 aaKnown RBP20.69■□□□□ 0.9
YBX3-201ENST00000228251 C8orf74Q6P047 294 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 SEPT14Q6ZU15 432 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 ERO1BQ86YB8 467 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 ASAP3Q8TDY4 903 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 TAS1R2Q8TE23 839 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 CLMNQ96JQ2 1002 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 KCNG1Q9UIX4 513 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 SOCS7O14512 581 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 HNRNPDLO14979 420 aaKnown RBP20.69■□□□□ 0.9
YBX3-201ENST00000228251 IREB2P48200 963 aaKnown RBP20.69■□□□□ 0.9
YBX3-201ENST00000228251 DNA2P51530 1060 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 SLC7A5Q01650 507 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 PEX26Q7Z412 305 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 FBXL13Q8NEE6 735 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 AFAP1L1Q8TED9 768 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 CTNNBL1Q8WYA6 563 aaPredicted RBP20.69■□□□□ 0.9
YBX3-201ENST00000228251 TAF4BQ92750 862 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 CCDC127Q96BQ5 260 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 PCDHB18PQ96TA0 734 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 THAP2Q9H0W7 228 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 ASCC2Q9H1I8 757 aaPredicted RBP20.69■□□□□ 0.9
YBX3-201ENST00000228251 ELP3Q9H9T3 547 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 COG5Q9UP83 839 aa20.69■□□□□ 0.9
YBX3-201ENST00000228251 MCM3APO60318 1980 aa20.68■□□□□ 0.9
YBX3-201ENST00000228251 SGPL1O95470 568 aa20.68■□□□□ 0.9
YBX3-201ENST00000228251 NAMPTP43490 491 aa20.68■□□□□ 0.9
YBX3-201ENST00000228251 POLGP54098 1239 aaPredicted RBP20.68■□□□□ 0.9
YBX3-201ENST00000228251 MRPS25P82663 173 aaKnown RBP20.68■□□□□ 0.9
YBX3-201ENST00000228251 GADL1Q6ZQY3 521 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms