RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 AGPAT5Q9NUQ2 364 aa15.38■□□□□ 0.05
SEC61B-201ENST00000223641 TNFSF13BQ9Y275 285 aa15.38■□□□□ 0.05
SEC61B-201ENST00000223641 ATP11BQ9Y2G3 1177 aa15.38■□□□□ 0.05
SEC61B-201ENST00000223641 USP20Q9Y2K6 914 aa15.38■□□□□ 0.05
SEC61B-201ENST00000223641 TISP43B9A030 160 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 RPS6KA5O75582 802 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 CLTBP09497 229 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 FGFR4P22455 802 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 SFPQP23246 707 aaKnown RBP eCLIP15.37■□□□□ 0.05
SEC61B-201ENST00000223641 LIG4P49917 911 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 LPIN1Q14693 890 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 GPNMBQ14956 572 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 ATF7IP2Q5U623 682 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 SLFN12LQ6IEE8 588 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 FAM43BQ6ZT52 329 aaPredicted RBP15.37■□□□□ 0.05
SEC61B-201ENST00000223641 LRRC8DQ7L1W4 858 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 LUZP1Q86V48 1076 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 HAPLN2Q9GZV7 340 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 AGO3Q9H9G7 860 aaKnown RBP15.37■□□□□ 0.05
SEC61B-201ENST00000223641 NFE2L3Q9Y4A8 694 aa15.37■□□□□ 0.05
SEC61B-201ENST00000223641 A0A0B4J269 797 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 KIAA0355O15063 1070 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 KIAA0391O15091 583 aaKnown RBP15.36■□□□□ 0.05
SEC61B-201ENST00000223641 GPR182O15218 404 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 CLIC2O15247 247 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 ERLIN2O94905 339 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 PARNO95453 639 aaKnown RBP15.36■□□□□ 0.05
SEC61B-201ENST00000223641 NR3C1P04150 777 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 NR2F2P24468 414 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 RPL13P26373 211 aaKnown RBP15.36■□□□□ 0.05
SEC61B-201ENST00000223641 MCCD1P59942 119 aaPredicted RBP15.36■□□□□ 0.05
SEC61B-201ENST00000223641 MCL1Q07820 350 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 ADAM9Q13443 819 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 CDKAL1Q5VV42 579 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 CATSPER4Q7RTX7 472 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 FILIP1Q7Z7B0 1213 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 IRF2BP1Q8IU81 584 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 CSGALNACT2Q8N6G5 542 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 BICD1Q96G01 975 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 ZBTB45Q96K62 511 aaPredicted RBP15.36■□□□□ 0.05
SEC61B-201ENST00000223641 FBXL18Q96ME1 805 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 CEP63Q96MT8 703 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 CBWD1Q9BRT8 395 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 SRRTQ9BXP5 876 aaKnown RBP15.36■□□□□ 0.05
SEC61B-201ENST00000223641 HIPK3Q9H422 1215 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 THAP9Q9H5L6 903 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 ERVK-5Q9HDB9 667 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 FANCLQ9NW38 375 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 ST3GAL5Q9UNP4 418 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 UMODL1Q5DID0 1318 aa15.36■□□□□ 0.05
SEC61B-201ENST00000223641 FSD2A1L4K1 749 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 BECN2A8MW95 431 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 CLDN3O15551 220 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 FAM189A1O60320 539 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 ZNF18P17022 549 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 MARSP56192 900 aaKnown RBP15.35■□□□□ 0.05
SEC61B-201ENST00000223641 NCBP1Q09161 790 aaKnown RBP15.35■□□□□ 0.05
SEC61B-201ENST00000223641 EEF1DP3Q658K8 133 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 ARMCX5Q6P1M9 558 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 MPZL3Q6UWV2 235 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 RNF214Q8ND24 703 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 NOC3LQ8WTT2 800 aaKnown RBP15.35■□□□□ 0.05
SEC61B-201ENST00000223641 MKNK1Q9BUB5 465 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 WNT8AQ9H1J5 351 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 PDZD7Q9H5P4 517 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 CHST12Q9NRB3 414 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 SAMSN1Q9NSI8 373 aaKnown RBP15.35■□□□□ 0.05
SEC61B-201ENST00000223641 TMEM39AQ9NV64 488 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 HSPBP1Q9NZL4 362 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 PADI3Q9ULW8 664 aa15.35■□□□□ 0.05
SEC61B-201ENST00000223641 SCN5AQ14524 2016 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 N4BP3O15049 544 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 CETN3O15182 167 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 MAPK13O15264 365 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 NBNO60934 754 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 FGFR1OPO95684 399 aaKnown RBP15.34■□□□□ 0.05
SEC61B-201ENST00000223641 CXCL10P02778 98 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 GHRP10912 638 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 DSC3Q14574 896 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 NOTUMQ6P988 496 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 XXYLT1Q8NBI6 393 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 POMGNT1Q8WZA1 660 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 CCDC51Q96ER9 411 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 BORCS6Q96GS4 357 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 CPB2Q96IY4 423 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 TRAIPQ9BWF2 469 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 CDT1Q9H211 546 aa15.34■□□□□ 0.05
SEC61B-201ENST00000223641 TRIM43BA6NCK2 446 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 LRRC10BA6NIK2 292 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 AKAP3O75969 853 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 LDHAP00338 332 aaKnown RBP15.33■□□□□ 0.04
SEC61B-201ENST00000223641 TIMP1P01033 207 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 MCF2P10911 925 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 CD52P31358 61 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 CASP4P49662 377 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 POU5F1Q01860 360 aaKnown RBP15.33■□□□□ 0.04
SEC61B-201ENST00000223641 PAK2Q13177 524 aa15.33■□□□□ 0.04
SEC61B-201ENST00000223641 NOLC1Q14978 699 aaKnown RBP eCLIP15.33■□□□□ 0.04
SEC61B-201ENST00000223641 TPD52L1Q16890 204 aaPredicted RBP15.33■□□□□ 0.04
SEC61B-201ENST00000223641 PLEKHG4Q58EX7 1191 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms