RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PLAAQ9Y263 795 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 FAM169AQ9Y6X4 670 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 KIAA1217Q5T5P2 1943 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 TMEM253P0C7T8 217 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 NR1D1P20393 614 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 GALCP54803 685 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 LMO3Q8TAP4 145 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 CYP39A1Q9NYL5 469 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 EXOC7Q9UPT5 735 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 EMSYQ7Z589 1322 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 BACH1O14867 736 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 ATP1A2P50993 1020 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 KIF22Q14807 665 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 TADA2BQ86TJ2 420 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 GLYCTKQ8IVS8 523 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 HVCN1Q96D96 273 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 AP1M1Q9BXS5 423 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 PCIF1Q9H4Z3 704 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 SLITRK6Q9H5Y7 841 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 TMBIM4Q9HC24 238 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 HSPBP1Q9NZL4 362 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 PAPPA2Q9BXP8 1791 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 SBF1O95248 1867 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 SPDYE16A6NNV3 312 aaPredicted RBP23.98■■□□□ 1.43
CCDC9-201ENST00000221922 STAM2O75886 525 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 HLTFQ14527 1009 aaKnown RBP eCLIP23.98■■□□□ 1.43
CCDC9-201ENST00000221922 TTC31Q49AM3 519 aaPredicted RBP23.98■■□□□ 1.43
CCDC9-201ENST00000221922 XKR9Q5GH70 373 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 RFFLQ8WZ73 363 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 LRRC45Q96CN5 670 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 CBWD1Q9BRT8 395 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 PCDHA10Q9Y5I2 948 aa23.98■■□□□ 1.43
CCDC9-201ENST00000221922 TMCO5BA8MYB1 307 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 H0YGN5 161 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 KRIT1O00522 736 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 PMM2O15305 246 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 TNFAIP3P21580 790 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 LSP1P33241 339 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 HSD17B3P37058 310 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 PEX3P56589 373 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 PHLDB3Q6NSJ2 640 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 PACS2Q86VP3 889 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 CTNNBL1Q8WYA6 563 aaPredicted RBP23.97■■□□□ 1.43
CCDC9-201ENST00000221922 SEC14L1Q92503 715 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 CDHR1Q96JP9 859 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 A1CFQ9NQ94 594 aaKnown RBP23.97■■□□□ 1.43
CCDC9-201ENST00000221922 TTC7AQ9ULT0 858 aaPredicted RBP23.97■■□□□ 1.43
CCDC9-201ENST00000221922 NFS1Q9Y697 457 aa23.97■■□□□ 1.43
CCDC9-201ENST00000221922 POLR2AP24928 1970 aaKnown RBP23.97■■□□□ 1.43
CCDC9-201ENST00000221922 NFASCO94856 1347 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 ATXN2Q99700 1313 aaKnown RBP23.96■■□□□ 1.43
CCDC9-201ENST00000221922 DKC1O60832 514 aaKnown RBP eCLIP23.96■■□□□ 1.431e-6■■■■■ 89.9
CCDC9-201ENST00000221922 USP2O75604 605 aaPredicted RBP23.96■■□□□ 1.43
CCDC9-201ENST00000221922 KCNA2P16389 499 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 SMTNP53814 917 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 ARHGAP44Q17R89 818 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 DAAM2Q86T65 1068 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 DDX47Q9H0S4 455 aaKnown RBP23.96■■□□□ 1.43
CCDC9-201ENST00000221922 EPN3Q9H201 632 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 RABEP2Q9H5N1 569 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 PTPRFP10586 1907 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 LCTP09848 1927 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 ARID2Q68CP9 1835 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 SRRM3A6NNA2 597 aaPredicted RBP23.96■■□□□ 1.43
CCDC9-201ENST00000221922 NDUFAB1O14561 156 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 UAP1Q16222 522 aaPredicted RBP23.96■■□□□ 1.43
CCDC9-201ENST00000221922 EPC2Q52LR7 807 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 CEP85LQ5SZL2 805 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 FAM102BQ5T8I3 360 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 B4GALNT4Q76KP1 1039 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 BBXQ8WY36 941 aaPredicted RBP23.96■■□□□ 1.43
CCDC9-201ENST00000221922 EFCC1Q9HA90 598 aa23.96■■□□□ 1.43
CCDC9-201ENST00000221922 TMEM150BA6NC51 233 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 SLC16A4O15374 487 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 RGS20O76081 388 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 DLG4P78352 724 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 OTUD6AQ7L8S5 288 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 MAATS1Q7Z4T9 603 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 SNCAIPQ9Y6H5 919 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 A0A0G2JMZ2 1700 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 TISP43B9A030 160 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 ITGA4P13612 1032 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 MDH1P40925 334 aaKnown RBP23.95■■□□□ 1.42
CCDC9-201ENST00000221922 MCCD1P59942 119 aaPredicted RBP23.95■■□□□ 1.42
CCDC9-201ENST00000221922 GUCY1A3Q02108 690 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 PPP3CAQ08209 521 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 DMP1Q13316 513 aaPredicted RBP23.95■■□□□ 1.42
CCDC9-201ENST00000221922 PTPROQ16827 1216 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 ANO5Q75V66 913 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 DDX42Q86XP3 938 aaKnown RBP eCLIP23.95■■□□□ 1.42
CCDC9-201ENST00000221922 SPATS2Q86XZ4 545 aaKnown RBP23.95■■□□□ 1.42
CCDC9-201ENST00000221922 ATP6V0A1Q93050 837 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 PAGR1Q9BTK6 254 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 NEUROG2Q9H2A3 272 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 C17orf75Q9HAS0 396 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 UBE2TQ9NPD8 197 aaPredicted RBP23.95■■□□□ 1.42
CCDC9-201ENST00000221922 AMFRQ9UKV5 643 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 USP20Q9Y2K6 914 aa23.95■■□□□ 1.42
CCDC9-201ENST00000221922 PLA2G4FQ68DD2 849 aa23.94■■□□□ 1.42
CCDC9-201ENST00000221922 CCDC26Q8TAB7 109 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms