RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 ZBTB5O15062 677 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 EIF3DO15371 548 aaKnown RBP eCLIP17.15■□□□□ 0.34
SF3A2-201ENST00000221494 NR3C1P04150 777 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 BMP3P12645 472 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 ATP5DP30049 168 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 SATB1Q01826 763 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 GIT2Q14161 759 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 ARSHQ5FYA8 562 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 ZDHHC24Q6UX98 284 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 OLIG1Q8TAK6 271 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 SLC35G2Q8TBE7 412 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 TRIM51Q9BSJ1 452 aa17.15■□□□□ 0.34
SF3A2-201ENST00000221494 POTEB3A0JP26 581 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 ANKRD62A6NC57 917 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 SPDYE3A6NKU9 549 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 POTECB2RU33 542 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 LIN7AO14910 233 aaPredicted RBP17.14■□□□□ 0.33
SF3A2-201ENST00000221494 RTN2O75298 545 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 RARGP13631 454 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 MKRN3Q13064 507 aaKnown RBP17.14■□□□□ 0.33
SF3A2-201ENST00000221494 AP3B2Q13367 1082 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 PRAMEF18Q5VWM3 479 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 POTEBQ6S5H4 581 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 CYFIP1Q7L576 1253 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 SPICE1Q8N0Z3 855 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 LNX1Q8TBB1 728 aaPredicted RBP17.14■□□□□ 0.33
SF3A2-201ENST00000221494 MDM1Q8TC05 714 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 BORCS6Q96GS4 357 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 IFT74Q96LB3 600 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 SELENOSQ9BQE4 189 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 GLIS2Q9BZE0 524 aaPredicted RBP17.14■□□□□ 0.33
SF3A2-201ENST00000221494 OLFML3Q9NRN5 406 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 NOP53Q9NZM5 478 aaKnown RBP17.14■□□□□ 0.33
SF3A2-201ENST00000221494 C15orf41Q9Y2V0 281 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 FRMPD4Q14CM0 1322 aa17.14■□□□□ 0.33
SF3A2-201ENST00000221494 DICER1Q9UPY3 1922 aaKnown RBP17.14■□□□□ 0.33
SF3A2-201ENST00000221494 SBF1O95248 1867 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 KIF3CO14782 793 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 SNX3O60493 162 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 ALAS1P13196 640 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 RPA1P27694 616 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 PTGIRP43119 386 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 CYP1B1Q16678 543 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 GALNTL6Q49A17 601 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 DCAF12L1Q5VU92 463 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 TRMT10CQ7L0Y3 403 aaKnown RBP17.13■□□□□ 0.33
SF3A2-201ENST00000221494 LRRC34Q8IZ02 419 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 UBL4BQ8N7F7 174 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 RNF25Q96BH1 459 aaPredicted RBP17.13■□□□□ 0.33
SF3A2-201ENST00000221494 TRIM6Q9C030 488 aaPredicted RBP17.13■□□□□ 0.33
SF3A2-201ENST00000221494 ADARB2Q9NS39 739 aaKnown RBP17.13■□□□□ 0.33
SF3A2-201ENST00000221494 DNM3Q9UQ16 869 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 EVI5O60447 810 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 AKAP3O75969 853 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 VCAM1P19320 739 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 CCND1P24385 295 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 CTNNA2P26232 953 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 SKIV2L2P42285 1042 aaKnown RBP17.13■□□□□ 0.33
SF3A2-201ENST00000221494 L3MBTL3Q96JM7 780 aaPredicted RBP17.13■□□□□ 0.33
SF3A2-201ENST00000221494 RPS6KC1Q96S38 1066 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 PSTPIP2Q9H939 334 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 GOPCQ9HD26 462 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 GINM1Q9NU53 330 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 GRHL1Q9NZI5 618 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 BAIAP2L1Q9UHR4 511 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 USP15Q9Y4E8 981 aaPredicted RBP17.13■□□□□ 0.33
SF3A2-201ENST00000221494 ASTN1O14525 1302 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 RPTORQ8N122 1335 aa17.13■□□□□ 0.33
SF3A2-201ENST00000221494 OPLAHO14841 1288 aa17.12■□□□□ 0.33
SF3A2-201ENST00000221494 WFS1O76024 890 aa17.12■□□□□ 0.33
SF3A2-201ENST00000221494 SUN1O94901 812 aa17.12■□□□□ 0.33
SF3A2-201ENST00000221494 NQO1P15559 274 aaKnown RBP17.12■□□□□ 0.33
SF3A2-201ENST00000221494 HOXD13P35453 343 aa17.12■□□□□ 0.33
SF3A2-201ENST00000221494 PSMC2P35998 433 aaKnown RBP17.12■□□□□ 0.33
SF3A2-201ENST00000221494 ZKSCAN8Q15776 578 aaPredicted RBP17.12■□□□□ 0.33
SF3A2-201ENST00000221494 DCAF17Q5H9S7 520 aaPredicted RBP17.12■□□□□ 0.33
SF3A2-201ENST00000221494 LOXHD1Q8IVV2 1947 aa17.12■□□□□ 0.33
SF3A2-201ENST00000221494 AZI2Q9H6S1 392 aa17.12■□□□□ 0.33
SF3A2-201ENST00000221494 ZNF112Q9UJU3 913 aa17.12■□□□□ 0.33
SF3A2-201ENST00000221494 PPP1R9AQ9ULJ8 1098 aa17.12■□□□□ 0.33
SF3A2-201ENST00000221494 PPP2R3BQ9Y5P8 575 aa17.12■□□□□ 0.33
SF3A2-201ENST00000221494 POTEFA5A3E0 1075 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 SHBGP04278 402 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 POTEIP0CG38 1075 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 POTEJP0CG39 1038 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 IRX1P78414 480 aaPredicted RBP17.11■□□□□ 0.33
SF3A2-201ENST00000221494 MAP2K1Q02750 393 aaPredicted RBP17.11■□□□□ 0.33
SF3A2-201ENST00000221494 KIF22Q14807 665 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 PPP2R5AQ15172 486 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 E2F5Q15329 346 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 CNGA2Q16280 664 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 QRICH1Q2TAL8 776 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 SYDE2Q5VT97 1194 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 DCAF15Q66K64 600 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 POTEEQ6S8J3 1075 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 SFR1Q86XK3 245 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 FAXDC2Q96IV6 333 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 NPHP3-ACAD11A0A0J9YXS1 232 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 RASGRF2O14827 1237 aa17.11■□□□□ 0.33
SF3A2-201ENST00000221494 MED24O75448 989 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms