RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 TACO1Q9BSH4 297 aaKnown RBP12.01□□□□□ -0.49
NEFM-201ENST00000221166 FAM129AQ9BZQ8 928 aa12.01□□□□□ -0.49
NEFM-201ENST00000221166 TRPC6Q9Y210 931 aa12.01□□□□□ -0.49
NEFM-201ENST00000221166 MRPL11Q9Y3B7 192 aaKnown RBP12.01□□□□□ -0.49
NEFM-201ENST00000221166 FOXO6A8MYZ6 492 aa12.01□□□□□ -0.49
NEFM-201ENST00000221166 PPFIA2O75334 1257 aa12.01□□□□□ -0.49
NEFM-201ENST00000221166 RWDD2BP57060 319 aa12.01□□□□□ -0.49
NEFM-201ENST00000221166 PPP3CAQ08209 521 aa12.01□□□□□ -0.49
NEFM-201ENST00000221166 ATG4AQ8WYN0 398 aa12.01□□□□□ -0.49
NEFM-201ENST00000221166 ARHGEF2Q92974 986 aaKnown RBP12.01□□□□□ -0.49
NEFM-201ENST00000221166 MKNK1Q9BUB5 465 aa12.01□□□□□ -0.49
NEFM-201ENST00000221166 GPRC5CQ9NQ84 441 aa12.01□□□□□ -0.49
NEFM-201ENST00000221166 PLIN4Q96Q06 1357 aa12□□□□□ -0.49
NEFM-201ENST00000221166 KIAA1551Q9HCM1 1747 aa12□□□□□ -0.49
NEFM-201ENST00000221166 ALAS1P13196 640 aa12□□□□□ -0.49
NEFM-201ENST00000221166 MAPK4P31152 587 aa12□□□□□ -0.49
NEFM-201ENST00000221166 PDE6CP51160 858 aa12□□□□□ -0.49
NEFM-201ENST00000221166 TRAF1Q13077 416 aa12□□□□□ -0.49
NEFM-201ENST00000221166 SLMAPQ14BN4 828 aa12□□□□□ -0.49
NEFM-201ENST00000221166 BMT2Q1RMZ1 405 aa12□□□□□ -0.49
NEFM-201ENST00000221166 SLC47A2Q86VL8 602 aa12□□□□□ -0.49
NEFM-201ENST00000221166 ZC3H3Q8IXZ2 948 aaKnown RBP12□□□□□ -0.49
NEFM-201ENST00000221166 FUKQ8N0W3 1084 aa12□□□□□ -0.49
NEFM-201ENST00000221166 CERKQ8TCT0 537 aa12□□□□□ -0.49
NEFM-201ENST00000221166 CHURC1Q8WUH1 139 aa12□□□□□ -0.49
NEFM-201ENST00000221166 ZKSCAN4Q969J2 545 aaPredicted RBP12□□□□□ -0.49
NEFM-201ENST00000221166 FAM84AQ96KN4 292 aa12□□□□□ -0.49
NEFM-201ENST00000221166 SEL1LQ9UBV2 794 aa12□□□□□ -0.49
NEFM-201ENST00000221166 SCN7AQ01118 1682 aa12□□□□□ -0.49
NEFM-201ENST00000221166 TCP11X1B4DZS4 312 aa12□□□□□ -0.49
NEFM-201ENST00000221166 SLC26A4O43511 780 aa12□□□□□ -0.49
NEFM-201ENST00000221166 STX2P32856 288 aa12□□□□□ -0.49
NEFM-201ENST00000221166 CLNS1AP54105 237 aaKnown RBP12□□□□□ -0.49
NEFM-201ENST00000221166 DRP2Q13474 957 aa12□□□□□ -0.49
NEFM-201ENST00000221166 PPP2R5AQ15172 486 aa12□□□□□ -0.49
NEFM-201ENST00000221166 CLUL1Q15846 466 aa12□□□□□ -0.49
NEFM-201ENST00000221166 HP1BP3Q5SSJ5 553 aaPredicted RBP12□□□□□ -0.49
NEFM-201ENST00000221166 UBAP2Q5T6F2 1119 aaKnown RBP12□□□□□ -0.49
NEFM-201ENST00000221166 CYP4F22Q6NT55 531 aa12□□□□□ -0.49
NEFM-201ENST00000221166 ZNF365Q70YC5 407 aa12□□□□□ -0.49
NEFM-201ENST00000221166 ZSWIM2Q8NEG5 633 aa12□□□□□ -0.49
NEFM-201ENST00000221166 ATP8B4Q8TF62 1192 aa12□□□□□ -0.49
NEFM-201ENST00000221166 SGSM3Q96HU1 749 aa12□□□□□ -0.49
NEFM-201ENST00000221166 DDX23Q9BUQ8 820 aaKnown RBP12□□□□□ -0.49
NEFM-201ENST00000221166 ADAM33Q9BZ11 813 aa12□□□□□ -0.49
NEFM-201ENST00000221166 CXorf56Q9H5V9 222 aa12□□□□□ -0.49
NEFM-201ENST00000221166 HSPBP1Q9NZL4 362 aa12□□□□□ -0.49
NEFM-201ENST00000221166 ANAPC7Q9UJX3 599 aa12□□□□□ -0.49
NEFM-201ENST00000221166 SCAF8Q9UPN6 1271 aaKnown RBP12□□□□□ -0.49
NEFM-201ENST00000221166 RTN2O75298 545 aa12□□□□□ -0.49
NEFM-201ENST00000221166 HSPA6P17066 643 aa12□□□□□ -0.49
NEFM-201ENST00000221166 COILP38432 576 aaPredicted RBP12□□□□□ -0.49
NEFM-201ENST00000221166 MFAP3P55082 362 aa12□□□□□ -0.49
NEFM-201ENST00000221166 PPATQ06203 517 aa12□□□□□ -0.49
NEFM-201ENST00000221166 SH3BP5LQ7L8J4 393 aa12□□□□□ -0.49
NEFM-201ENST00000221166 SIAH1Q8IUQ4 282 aa12□□□□□ -0.49
NEFM-201ENST00000221166 MKL1Q969V6 931 aa12□□□□□ -0.49
NEFM-201ENST00000221166 KIFC3Q9BVG8 833 aa12□□□□□ -0.49
NEFM-201ENST00000221166 CCPG1Q9ULG6 757 aa12□□□□□ -0.49
NEFM-201ENST00000221166 TPX2Q9ULW0 747 aaKnown RBP12□□□□□ -0.49
NEFM-201ENST00000221166 ADRA2BP18089 450 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 KRT17Q04695 432 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 NEDD9Q14511 834 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 KYNUQ16719 465 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 ERMARDQ5T6L9 678 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 HAUS6Q7Z4H7 955 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 C1orf131Q8NDD1 294 aaKnown RBP11.99□□□□□ -0.49
NEFM-201ENST00000221166 KIFAP3Q92845 792 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 FGFR1OP2Q9NVK5 253 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 NKIRAS1Q9NYS0 192 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 WRAP73Q9P2S5 460 aaPredicted RBP11.99□□□□□ -0.49
NEFM-201ENST00000221166 ECE2O60344 883 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 RARAP10276 462 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 JAG1P78504 1218 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 DPY19L2P1Q6NXN4 242 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 TTC27Q6P3X3 843 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 SLC13A5Q86YT5 568 aaPredicted RBP11.99□□□□□ -0.49
NEFM-201ENST00000221166 KIRREL3Q8IZU9 778 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 DHX38Q92620 1227 aaKnown RBP11.99□□□□□ -0.49
NEFM-201ENST00000221166 MBOAT7Q96N66 472 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 TMEM206Q9H813 350 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 ABCA3Q99758 1704 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 ANKRD63C9JTQ0 380 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 NPR1P16066 1061 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 KAZNQ674X7 775 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 LMBRD2Q68DH5 695 aaPredicted RBP11.99□□□□□ -0.49
NEFM-201ENST00000221166 PODNQ7Z5L7 613 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 SEPT12Q8IYM1 358 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 KIF2BQ8N4N8 673 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 RUNDC3BQ96NL0 473 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 PI4K2AQ9BTU6 479 aa11.99□□□□□ -0.49
NEFM-201ENST00000221166 POLRMTO00411 1230 aaKnown RBP11.98□□□□□ -0.49
NEFM-201ENST00000221166 AGTP01019 485 aa11.98□□□□□ -0.49
NEFM-201ENST00000221166 ATF2P15336 505 aa11.98□□□□□ -0.49
NEFM-201ENST00000221166 EIF2AK2P19525 551 aaKnown RBP11.98□□□□□ -0.49
NEFM-201ENST00000221166 HOXA10P31260 410 aaPredicted RBP11.98□□□□□ -0.49
NEFM-201ENST00000221166 CIITAP33076 1130 aa11.98□□□□□ -0.49
NEFM-201ENST00000221166 PLCB3Q01970 1234 aa11.98□□□□□ -0.49
NEFM-201ENST00000221166 RASA3Q14644 834 aa11.98□□□□□ -0.49
NEFM-201ENST00000221166 SWT1Q5T5J6 900 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms