RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 XXYLT1Q8NBI6 393 aa14.33□□□□□ -0.12
SRP54-201ENST00000216774 IPO4Q8TEX9 1081 aaKnown RBP14.33□□□□□ -0.12
SRP54-201ENST00000216774 CD101Q93033 1021 aa14.33□□□□□ -0.12
SRP54-201ENST00000216774 RNF25Q96BH1 459 aaPredicted RBP14.33□□□□□ -0.12
SRP54-201ENST00000216774 STMN4Q9H169 189 aaPredicted RBP14.33□□□□□ -0.12
SRP54-201ENST00000216774 YY1AP1Q9H869 796 aa14.33□□□□□ -0.12
SRP54-201ENST00000216774 NOCTQ9UK39 431 aaKnown RBP14.33□□□□□ -0.12
SRP54-201ENST00000216774 MTUS1Q9ULD2 1270 aa14.33□□□□□ -0.12
SRP54-201ENST00000216774 PCDHA3Q9Y5H8 950 aa14.33□□□□□ -0.12
SRP54-201ENST00000216774 RPTORQ8N122 1335 aa14.33□□□□□ -0.12
SRP54-201ENST00000216774 AGTP01019 485 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 P4HBP07237 508 aaKnown RBP14.32□□□□□ -0.12
SRP54-201ENST00000216774 PLS3P13797 630 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 COMTP21964 271 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 SLMAPQ14BN4 828 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 ANKRD20A8PQ5CZ79 823 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 C1orf220Q5T0J3 134 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 FAM160B2Q86V87 743 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 COL23A1Q86Y22 540 aaPredicted RBP14.32□□□□□ -0.12
SRP54-201ENST00000216774 ACER1Q8TDN7 264 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 OSBPL7Q9BZF2 842 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 TAOK3Q9H2K8 898 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 ST6GALNAC4Q9H4F1 302 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 A1CFQ9NQ94 594 aaKnown RBP14.32□□□□□ -0.12
SRP54-201ENST00000216774 SMCHD1A6NHR9 2005 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 RPL21P46778 160 aaKnown RBP14.32□□□□□ -0.12
SRP54-201ENST00000216774 GCLMP48507 274 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 MARCKSL1P49006 195 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 CCDC137Q6PK04 289 aaKnown RBP14.32□□□□□ -0.12
SRP54-201ENST00000216774 NIPA1Q7RTP0 329 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 MIER3Q7Z3K6 550 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 EPS8L1Q8TE68 723 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 ZNF622Q969S3 477 aaKnown RBP eCLIP14.32□□□□□ -0.127e-7■■□□□ 11.8
SRP54-201ENST00000216774 CCDC114Q96M63 670 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 HSPBP1Q9NZL4 362 aa14.32□□□□□ -0.12
SRP54-201ENST00000216774 PHF20L1A8MW92 1017 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 RGS16O15492 202 aaPredicted RBP14.31□□□□□ -0.12
SRP54-201ENST00000216774 CTNND1O60716 968 aaKnown RBP14.31□□□□□ -0.12
SRP54-201ENST00000216774 SLC29A2Q14542 456 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 MESDQ14696 234 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 AADACL2Q6P093 401 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 TTC27Q6P3X3 843 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 CYFIP1Q7L576 1253 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 C12orf50Q8NA57 414 aaPredicted RBP14.31□□□□□ -0.12
SRP54-201ENST00000216774 MDM1Q8TC05 714 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 PRMT6Q96LA8 375 aaPredicted RBP14.31□□□□□ -0.12
SRP54-201ENST00000216774 ZNF317Q96PQ6 595 aaPredicted RBP14.31□□□□□ -0.12
SRP54-201ENST00000216774 IWS1Q96ST2 819 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 PCDHB18PQ96TA0 734 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 CBWD1Q9BRT8 395 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 TIPINQ9BVW5 301 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 KDM4CQ9H3R0 1056 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 PCIF1Q9H4Z3 704 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 KLC4Q9NSK0 619 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 TRPC5Q9UL62 973 aaPredicted RBP14.31□□□□□ -0.12
SRP54-201ENST00000216774 TMEM110-MUSTN1A8MSY1 372 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 LYPLA2O95372 231 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 CYP1A2P05177 515 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 MMEP08473 750 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 GHRP10912 638 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 RARGP13631 454 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 CHRNB2P17787 502 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 ITGB5P18084 799 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 MXI1P50539 228 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 HSD17B4P51659 736 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 GTF2BQ00403 316 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 TNIP1Q15025 636 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 MEX3CQ5U5Q3 659 aaKnown RBP14.31□□□□□ -0.12
SRP54-201ENST00000216774 NOP9Q86U38 636 aaKnown RBP14.31□□□□□ -0.12
SRP54-201ENST00000216774 SLC13A5Q86YT5 568 aaPredicted RBP14.31□□□□□ -0.12
SRP54-201ENST00000216774 ATXN2LQ8WWM7 1075 aaKnown RBP14.31□□□□□ -0.12
SRP54-201ENST00000216774 CCDC134Q9H6E4 229 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 SLC40A1Q9NP59 571 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 TMOD2Q9NZR1 351 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 UVRAGQ9P2Y5 699 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 ZBTB21Q9ULJ3 1066 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 TRPC6Q9Y210 931 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 AFF2P51816 1311 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 PASKQ96RG2 1323 aa14.31□□□□□ -0.12
SRP54-201ENST00000216774 ASAP2O43150 1006 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 SGPL1O95470 568 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 MMP10P09238 476 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 PYGMP11217 842 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 CHN1P15882 459 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 COILP38432 576 aaPredicted RBP14.3□□□□□ -0.12
SRP54-201ENST00000216774 RASA3Q14644 834 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 LDHDQ86WU2 507 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 ZDHHC14Q8IZN3 488 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 SLC17A8Q8NDX2 589 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 CCT6BQ92526 530 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 SHC3Q92529 594 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 ART4Q93070 314 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 TMEM117Q9H0C3 514 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 ADAM7Q9H2U9 754 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 SEMA4AQ9H3S1 761 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 KCNH7Q9NS40 1196 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 FEM1BQ9UK73 627 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 GTF3C4Q9UKN8 822 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 ZHX2Q9Y6X8 837 aa14.3□□□□□ -0.12
SRP54-201ENST00000216774 TISP43B9A030 160 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms