RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 DONSONQ9NYP3 566 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 PCDHAC2Q9Y5I4 1007 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 RSPH10B2B2RC85 870 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 B3GAT3O94766 335 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 CD4P01730 458 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 MYL1P05976 194 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 RSPH10BP0C881 870 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 STAP1Q9ULZ2 295 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 ZNF445P59923 1031 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 CFAP221Q4G0U5 840 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 CXCL17Q6UXB2 119 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 THOC1Q96FV9 657 aaKnown RBP14.7□□□□□ -0.06
SIX4-201ENST00000216513 RPGRIP1Q96KN7 1286 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 RMDN2Q96LZ7 410 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 APOL5Q9BWW9 433 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 FAN1Q9Y2M0 1017 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 STK36Q9NRP7 1315 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 RICTORQ6R327 1708 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 KLRC1P26715 233 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 GRK4P32298 578 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 ZFPM1Q8IX07 1006 aa14.7□□□□□ -0.06
SIX4-201ENST00000216513 F8W8V4 182 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 SPTLC1O15269 473 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 EYA4O95677 639 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 MYL4P12829 197 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 KPNA1P52294 538 aaPredicted RBP14.69□□□□□ -0.06
SIX4-201ENST00000216513 NPEPPSP55786 919 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 YWHAGP61981 247 aaKnown RBP eCLIP14.69□□□□□ -0.06
SIX4-201ENST00000216513 KRT71Q3SY84 523 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 NXNQ6DKJ4 435 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 KIAA1683Q9H0B3 1180 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 KIF1AQ12756 1690 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 FRMD3A2A2Y4 597 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 H3BRB1 525 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 VWA5AO00534 786 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 TTC31Q49AM3 519 aaPredicted RBP14.69□□□□□ -0.06
SIX4-201ENST00000216513 OSMRQ99650 979 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 TUT1Q9H6E5 874 aaKnown RBP14.69□□□□□ -0.06
SIX4-201ENST00000216513 TTLL13PA6NNM8 815 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 SESN3P58005 492 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 NR1H3Q13133 447 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 CPB2Q96IY4 423 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 OGFRQ9NZT2 677 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 CCNE1P24864 410 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 HOXA10P31260 410 aaPredicted RBP14.69□□□□□ -0.06
SIX4-201ENST00000216513 ARL4DP49703 201 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 RPS6KA2Q15349 733 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 SV2CQ496J9 727 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 SGO2Q562F6 1265 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 RILPQ96NA2 401 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 PRMT7Q9NVM4 692 aaPredicted RBP14.69□□□□□ -0.06
SIX4-201ENST00000216513 EHD2Q9NZN4 543 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 H7C4K7 107 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 ATP1A3P13637 1013 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 GYS2P54840 703 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 TMEM132BQ14DG7 1078 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 XRRA1Q6P2D8 792 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 TMEM35BQ8NCS4 154 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 ZNF609O15014 1411 aa14.69□□□□□ -0.06
SIX4-201ENST00000216513 TRIM49BA6NDI0 452 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 TXNDC9O14530 226 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 IKBKBO14920 756 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 AOC2O75106 756 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 RFX5P48382 616 aaPredicted RBP14.68□□□□□ -0.06
SIX4-201ENST00000216513 ARHGAP23Q9P227 1491 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 SLCO1A2P46721 670 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 AMHR2Q16671 573 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 KNOP1Q1ED39 458 aaKnown RBP14.68□□□□□ -0.06
SIX4-201ENST00000216513 ZNF484Q5JVG2 852 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 HHATQ5VTY9 493 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 IFT20Q8IY31 132 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 MUC3BQ9H195 1237 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 PXMP2Q9NR77 195 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 OLA1Q9NTK5 396 aaKnown RBP14.68□□□□□ -0.06
SIX4-201ENST00000216513 ATP5DP30049 168 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 IFNAR2P48551 515 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 APLP1P51693 650 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 IQCB1Q15051 598 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 PDGFDQ9GZP0 370 aaPredicted RBP14.68□□□□□ -0.06
SIX4-201ENST00000216513 ADAM22Q9P0K1 906 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 DNAJC12Q9UKB3 198 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 A0A1W2PQ27 194 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 A0A1W2PQ64 194 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 A0A1W2PQD8 194 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 POC1B-GALNT4F8VUJ3 575 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 ALDH2P05091 517 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 CTCFP49711 727 aaPredicted RBP14.68□□□□□ -0.06
SIX4-201ENST00000216513 SETDB1Q15047 1291 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 PPP1R2P3Q6NXS1 205 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 SLC35F6Q8N357 371 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 TBK1Q9UHD2 729 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 FAM47DPA6NHR8 397 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 DFFAO00273 331 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 GNA15P30679 374 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 CTNNA1P35221 906 aaKnown RBP14.68□□□□□ -0.06
SIX4-201ENST00000216513 LLGL2Q6P1M3 1020 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 SPATA17Q96L03 361 aa14.68□□□□□ -0.06
SIX4-201ENST00000216513 TSR3Q9UJK0 312 aaKnown RBP14.68□□□□□ -0.06
SIX4-201ENST00000216513 MROH2AA6NES4 1674 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms