RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 ALKBH8Q96BT7 664 aaKnown RBP14.4□□□□□ -0.1
SF3A1-201ENST00000215793 ATP6V1G3Q96LB4 118 aa14.4□□□□□ -0.1
SF3A1-201ENST00000215793 SENP1Q9P0U3 644 aa14.4□□□□□ -0.1
SF3A1-201ENST00000215793 E2F6O75461 281 aa14.4□□□□□ -0.1
SF3A1-201ENST00000215793 C1orf228Q6PIY5 440 aa14.4□□□□□ -0.1
SF3A1-201ENST00000215793 SNX19Q92543 992 aa14.4□□□□□ -0.1
SF3A1-201ENST00000215793 THOC1Q96FV9 657 aaKnown RBP14.4□□□□□ -0.1
SF3A1-201ENST00000215793 ABT1Q9ULW3 272 aaKnown RBP14.4□□□□□ -0.1
SF3A1-201ENST00000215793 ESYT3A0FGR9 886 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 NCK2O43639 380 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 CREB3O43889 395 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 NOP14P78316 857 aaKnown RBP14.39□□□□□ -0.11
SF3A1-201ENST00000215793 FAM102AQ5T9C2 384 aaPredicted RBP14.39□□□□□ -0.11
SF3A1-201ENST00000215793 DHX40Q8IX18 779 aaKnown RBP14.39□□□□□ -0.11
SF3A1-201ENST00000215793 CCNYL1Q8N7R7 359 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 SAAL1Q96ER3 474 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 H3BRJ5 948 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 SLC1A1P43005 524 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 GYS2P54840 703 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 C12orf60Q5U649 245 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 MRFAP1Q9Y605 127 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 ABCA8O94911 1581 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 TMCC1O94876 653 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 TRIM49P0CI25 452 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 TRIM49CP0CI26 452 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 C1orf146Q5VVC0 180 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 ZBED8Q8IZ13 594 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 COG1Q8WTW3 980 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 N4BP2L2Q92802 583 aaPredicted RBP14.39□□□□□ -0.11
SF3A1-201ENST00000215793 ZNF560Q96MR9 790 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 TRIM9Q9C026 710 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 POLD4Q9HCU8 107 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 IRAK4Q9NWZ3 460 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 NDE1Q9NXR1 346 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 ZNF212Q9UDV6 495 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 LIMA1Q9UHB6 759 aaKnown RBP14.39□□□□□ -0.11
SF3A1-201ENST00000215793 SLC16A3O15427 465 aaKnown RBP14.39□□□□□ -0.11
SF3A1-201ENST00000215793 KCNV1Q6PIU1 500 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 NUDCD3Q8IVD9 361 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 SPATA4Q8NEY3 305 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 GANCQ8TET4 914 aa14.39□□□□□ -0.11
SF3A1-201ENST00000215793 A8MXQ7 604 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 NNMTP40261 264 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 KCNJ6P48051 423 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 EXOSC10Q01780 885 aaKnown RBP14.38□□□□□ -0.11
SF3A1-201ENST00000215793 NSUN2Q08J23 767 aaKnown RBP eCLIP14.38□□□□□ -0.11
SF3A1-201ENST00000215793 RABL6Q3YEC7 729 aaPredicted RBP14.38□□□□□ -0.11
SF3A1-201ENST00000215793 IZUMO3Q5VZ72 239 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 ZC3H18Q86VM9 953 aaKnown RBP14.38□□□□□ -0.11
SF3A1-201ENST00000215793 SP8Q8IXZ3 490 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 URGCPQ8TCY9 931 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 ARHGEF1Q92888 912 aaKnown RBP14.38□□□□□ -0.11
SF3A1-201ENST00000215793 CEP19Q96LK0 163 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 TGS1Q96RS0 853 aaKnown RBP14.38□□□□□ -0.11
SF3A1-201ENST00000215793 FAM217BQ9NTX9 383 aaPredicted RBP14.38□□□□□ -0.11
SF3A1-201ENST00000215793 PLA2R1Q13018 1463 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 PRAMEP78395 509 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 PDCD6IPQ8WUM4 868 aaKnown RBP14.38□□□□□ -0.11
SF3A1-201ENST00000215793 DHX35Q9H5Z1 703 aaKnown RBP14.38□□□□□ -0.11
SF3A1-201ENST00000215793 FBXO2Q9UK22 296 aaPredicted RBP14.38□□□□□ -0.11
SF3A1-201ENST00000215793 AXIN2Q9Y2T1 843 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 H0Y3Z8 333 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 CCDC22O60826 627 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 FCER1AP12319 257 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 FOXO4P98177 505 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 STAT4Q14765 748 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 IMPG1Q17R60 797 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 STAG2Q8N3U4 1231 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 AGPAT1Q99943 283 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 ING2Q9H160 280 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 OVOS2A0A0G2JMS6 1433 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 OVOS2A0A0J9YW53 1432 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 OVOS2Q6IE36 1432 aa14.38□□□□□ -0.11
SF3A1-201ENST00000215793 ZBBXA8MT70 800 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 KIF28PB7ZC32 967 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 AKR1B1P15121 316 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 POU5F1BQ06416 359 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 ANKRD40Q6AI12 368 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 LDHDQ86WU2 507 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 TNIP3Q96KP6 325 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 RNPC3Q96LT9 517 aaKnown RBP14.37□□□□□ -0.11
SF3A1-201ENST00000215793 HDAC6Q9UBN7 1215 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 MAP3K4Q9Y6R4 1608 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 RTN2O75298 545 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 ANP32DO95626 131 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 TYK2P29597 1187 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 CDH6P55285 790 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 HABP4Q5JVS0 413 aaKnown RBP14.37□□□□□ -0.11
SF3A1-201ENST00000215793 TTC23LQ6PF05 361 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 NLRP14Q86W24 1093 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 ATL2Q8NHH9 583 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 MMTAG2Q9BU76 263 aaKnown RBP14.37□□□□□ -0.11
SF3A1-201ENST00000215793 DCTN4Q9UJW0 460 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 SSU72P8A0A1W2PR75 194 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 SLC26A4O43511 780 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 NKX1-1Q15270 411 aaPredicted RBP14.37□□□□□ -0.11
SF3A1-201ENST00000215793 ZBTB41Q5SVQ8 909 aa14.37□□□□□ -0.11
SF3A1-201ENST00000215793 SYDE1Q6ZW31 735 aaPredicted RBP14.37□□□□□ -0.11
SF3A1-201ENST00000215793 GSPT2Q8IYD1 628 aaKnown RBP14.37□□□□□ -0.11
SF3A1-201ENST00000215793 ELMOD1Q8N336 334 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms