RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 CNOT7Q9UIV1 285 aaKnown RBP21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 TTC7AQ9ULT0 858 aaPredicted RBP21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 SMIM24O75264 130 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 ADCY8P40145 1251 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 ABL2P42684 1182 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 ARHGAP4P98171 946 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 QRICH1Q2TAL8 776 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 PHLDB3Q6NSJ2 640 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 GBP7Q8N8V2 638 aaPredicted RBP21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 RUNDC3BQ96NL0 473 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 HEMGNQ9BXL5 484 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 PPP1R12CQ9BZL4 782 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 SNED1Q8TER0 1413 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 SMNDC1O75940 238 aaKnown RBP eCLIP21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 UFL1O94874 794 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 SETDB1Q15047 1291 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 TPTE2Q6XPS3 522 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 RXFP1Q9HBX9 757 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 APEX2Q9UBZ4 518 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 SSR1P43307 286 aaKnown RBP21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 ZFYVE27Q5T4F4 411 aa21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 AP1ARQ63HQ0 302 aa21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 SYT2Q8N9I0 419 aaPredicted RBP21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 TBC1D16Q8TBP0 767 aa21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 KCNMB3Q9NPA1 279 aa21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 DIS3Q9Y2L1 958 aaKnown RBP21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 SPATA31C1P0DKV0 1188 aa21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 GCLMP48507 274 aa21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 MGAT5Q09328 741 aa21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 FOXR2Q6PJQ5 311 aa21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 LONP2Q86WA8 852 aa21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 ECHDC2Q86YB7 292 aa21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 PITPNM2Q9BZ72 1349 aa21.53■■□□□ 1.04
PPP1R3F-201ENST00000055335 TTLL1O95922 423 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 CTCFP49711 727 aaPredicted RBP21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 PPP4CP60510 307 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 MXRA7P84157 204 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 RRP1BQ14684 758 aaKnown RBP21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 NUDCD1Q96RS6 583 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 SLCO1B3Q9NPD5 702 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 ARHGEF3Q9NR81 526 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 TISP43B9A030 160 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 GBP1P32455 592 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 C2CD6Q53TS8 623 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 SLC13A5Q86YT5 568 aaPredicted RBP21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 SPIRE2Q8WWL2 714 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 MYLK2Q9H1R3 596 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 POC1B-GALNT4F8VUJ3 575 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 GRIK3Q13003 919 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 SHROOM1Q2M3G4 852 aaPredicted RBP21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 DAB2IPQ5VWQ8 1189 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 CROCCP2Q86T23 111 aa21.52■■□□□ 1.04
PPP1R3F-201ENST00000055335 RASA4BC9J798 803 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 UBAP1LF5GYI3 381 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 hCG_1984214I3L0E3 225 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 RASA4O43374 803 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 CALCAP01258 141 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 GPC5P78333 572 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 RHOT2Q8IXI1 618 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 FAM178BQ8IXR5 827 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 ZNF713Q8N859 430 aaPredicted RBP21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 NENFQ9UMX5 172 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 CBX6O95503 412 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 DLG4P78352 724 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 CLEC4GQ6UXB4 293 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 SLFN12Q8IYM2 578 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 PPM1KQ8N3J5 372 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 SH2D3AQ9BRG2 576 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 NUP85Q9BW27 656 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 DNAJC18Q9H819 358 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 NCANO14594 1321 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 ANKRD36CQ5JPF3 1778 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 ITGA8P53708 1063 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 GALNTL6Q49A17 601 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 ODR4Q5SWX8 454 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 HYIQ5T013 277 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 BTNL9Q6UXG8 535 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 LINC00116Q8NCU8 138 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 CHST7Q9NS84 486 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 PKD2L1Q9P0L9 805 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 ZFATQ9P243 1243 aa21.51■■□□□ 1.03
PPP1R3F-201ENST00000055335 WDR91A4D1P6 747 aa21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 DPPA5A6NC42 116 aa21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 FAM86B1E9PN63 330 aa21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 EML1O00423 815 aa21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 FAM86B2P0C5J1 330 aa21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 DRG2P55039 364 aaKnown RBP21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 SPDYCQ5MJ68 293 aa21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 CKAP2Q8WWK9 683 aa21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 ZNF653Q96CK0 615 aa21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 RIMBP2O15034 1052 aa21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 ENTPD5O75356 428 aa21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 SMARCA1P28370 1054 aa21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 MIGA2Q7L4E1 593 aa21.5■■□□□ 1.03
PPP1R3F-201ENST00000055335 ROBO3Q96MS0 1386 aa21.49■■□□□ 1.03
PPP1R3F-201ENST00000055335 MIF4GDA9UHW6 222 aaKnown RBP21.49■■□□□ 1.03
PPP1R3F-201ENST00000055335 C6orf229H3BNL8 230 aa21.49■■□□□ 1.03
PPP1R3F-201ENST00000055335 SGPL1O95470 568 aa21.49■■□□□ 1.03
PPP1R3F-201ENST00000055335 RPA1P27694 616 aa21.49■■□□□ 1.03
PPP1R3F-201ENST00000055335 EPHB2P29323 1055 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms