RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SWSAP1Q6NVH7 229 aa14.18□□□□□ -0.14
CTNS-201ENST00000046640 KCNV1Q6PIU1 500 aa14.18□□□□□ -0.14
CTNS-201ENST00000046640 KDM7AQ6ZMT4 941 aa14.18□□□□□ -0.14
CTNS-201ENST00000046640 B4GALNT4Q76KP1 1039 aa14.18□□□□□ -0.14
CTNS-201ENST00000046640 KCTD17Q8N5Z5 321 aa14.18□□□□□ -0.14
CTNS-201ENST00000046640 BSNDQ8WZ55 320 aa14.18□□□□□ -0.14
CTNS-201ENST00000046640 CEP170P1Q96L14 293 aa14.18□□□□□ -0.14
CTNS-201ENST00000046640 TAF1DQ9H5J8 278 aaPredicted RBP14.18□□□□□ -0.14
CTNS-201ENST00000046640 TMEM206Q9H813 350 aa14.18□□□□□ -0.14
CTNS-201ENST00000046640 TBC1D22BQ9NU19 505 aa14.18□□□□□ -0.14
CTNS-201ENST00000046640 DENND3A2RUS2 1198 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 SMIM23A6NLE4 172 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 DCDC2CA8MYV0 355 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 PGRMC1O00264 195 aaKnown RBP14.17□□□□□ -0.14
CTNS-201ENST00000046640 FTLP02792 175 aaPredicted RBP14.17□□□□□ -0.14
CTNS-201ENST00000046640 MYZAPP0CAP1 466 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 ADSSP30520 456 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 PSMC5P62195 406 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 LMBRD2Q68DH5 695 aaPredicted RBP14.17□□□□□ -0.14
CTNS-201ENST00000046640 INTS8Q75QN2 995 aaKnown RBP14.17□□□□□ -0.14
CTNS-201ENST00000046640 PHLDB2Q86SQ0 1253 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 RPUSD2Q8IZ73 545 aaKnown RBP14.17□□□□□ -0.14
CTNS-201ENST00000046640 TMEM117Q9H0C3 514 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 AMFRQ9UKV5 643 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 NENFQ9UMX5 172 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 TTI1O43156 1089 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 CYP26A1O43174 497 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 NR3C2P08235 984 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 MUTP22033 750 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 NPTX2P47972 431 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 MKRN4PQ13434 485 aaPredicted RBP14.17□□□□□ -0.14
CTNS-201ENST00000046640 CHADLQ6NUI6 762 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 NLRX1Q86UT6 975 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 CPNE8Q86YQ8 564 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 NEK9Q8TD19 979 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 SEMA4DQ92854 862 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 BTBD6Q96KE9 485 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 AGPAT1Q99943 283 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 PI4K2AQ9BTU6 479 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 GEMIN8Q9NWZ8 242 aaKnown RBP14.17□□□□□ -0.14
CTNS-201ENST00000046640 CTTNBP2NLQ9P2B4 639 aa14.17□□□□□ -0.14
CTNS-201ENST00000046640 NOVA2Q9UNW9 492 aaKnown RBP14.17□□□□□ -0.14
CTNS-201ENST00000046640 BTNL10A8MVZ5 291 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 WDR64B1ANS9 1081 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 MEFVO15553 781 aaPredicted RBP14.16□□□□□ -0.14
CTNS-201ENST00000046640 CLSTN1O94985 981 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 TNFRSF8P28908 595 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 BAG6P46379 1132 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 MXI1P50539 228 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 UAP1Q16222 522 aaPredicted RBP14.16□□□□□ -0.14
CTNS-201ENST00000046640 SNRNP35Q16560 246 aaKnown RBP14.16□□□□□ -0.14
CTNS-201ENST00000046640 NFIL3Q16649 462 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 EPC2Q52LR7 807 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 ANGEL2Q5VTE6 544 aaKnown RBP14.16□□□□□ -0.14
CTNS-201ENST00000046640 CYFIP1Q7L576 1253 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 SLC47A2Q86VL8 602 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 MYCBPAPQ8TBZ2 947 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 LMBR1Q8WVP7 490 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 DHX38Q92620 1227 aaKnown RBP14.16□□□□□ -0.14
CTNS-201ENST00000046640 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.16□□□□□ -0.14
CTNS-201ENST00000046640 ZNF862O60290 1169 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 CPP00450 1065 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 CNGA1P29973 690 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 CETN1Q12798 172 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 UHMK1Q8TAS1 419 aaKnown RBP14.16□□□□□ -0.14
CTNS-201ENST00000046640 WHAMMQ8TF30 809 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 RUBCNQ92622 972 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 PBKQ96KB5 322 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 TRIM51Q9BSJ1 452 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 DBR1Q9UK59 544 aaKnown RBP14.16□□□□□ -0.14
CTNS-201ENST00000046640 UBE4BO95155 1302 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 BACE1P56817 501 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 DCAF12L1Q5VU92 463 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 SLC9A9Q8IVB4 645 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 SCFD2Q8WU76 684 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 RFFLQ8WZ73 363 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 KMT5AQ9NQR1 393 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 TBX20Q9UMR3 447 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 STXBP5LQ9Y2K9 1186 aa14.16□□□□□ -0.14
CTNS-201ENST00000046640 MARCKSL1P49006 195 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 GTF2BQ00403 316 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 MESDQ14696 234 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 POMGNT1Q8WZA1 660 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 PCDHB18PQ96TA0 734 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 TMBIM4Q9HC24 238 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 PICK1Q9NRD5 415 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 SEPT9Q9UHD8 586 aaPredicted RBP14.15□□□□□ -0.14
CTNS-201ENST00000046640 RBBP6Q7Z6E9 1792 aaKnown RBP14.15□□□□□ -0.14
CTNS-201ENST00000046640 RGS20O76081 388 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 TMEM253P0C7T8 217 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 ECHS1P30084 290 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 FSTL1Q12841 308 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 DMP1Q13316 513 aaPredicted RBP14.15□□□□□ -0.14
CTNS-201ENST00000046640 QPCTQ16769 361 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 SLFN11Q7Z7L1 901 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 C4orf19Q8IY42 314 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 TMEM161BQ8NDZ6 487 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 MDM1Q8TC05 714 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 ALG3Q92685 438 aa14.15□□□□□ -0.14
CTNS-201ENST00000046640 BICD1Q96G01 975 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms