RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 UNC13DQ70J99 1090 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 DGKHQ86XP1 1220 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 SNIP1Q8TAD8 396 aaKnown RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 THAP11Q96EK4 314 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 ZNF577Q9BSK1 485 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 OSBPL5Q9H0X9 879 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 EPN3Q9H201 632 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 SERPINB13Q9UIV8 391 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 DLATP10515 647 aaKnown RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 RPL22P35268 128 aaKnown RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 TCP11X2Q5H9J9 407 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 ATAD3BQ5T9A4 648 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 DEPDC1Q5TB30 811 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 RHOT1Q8IXI2 618 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 ATP6V1G3Q96LB4 118 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 THUMPD2Q9BTF0 503 aaKnown RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 KMT5AQ9NQR1 393 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 RCOR1Q9UKL0 485 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 SHROOM3Q8TF72 1996 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 TRPC5OSA6NMA1 111 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 SLC16A3O15427 465 aaKnown RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 SLC2A3P11169 496 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 RGS2P41220 211 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PLD3Q8IV08 490 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 SULF1Q8IWU6 871 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 ULK4Q96C45 1275 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 NDST4Q9H3R1 872 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 SOX13Q9UN79 622 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PPLO60437 1756 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PNMA6FA0A0J9YX94 578 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 K7ERI5 159 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PCCAP05165 728 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PRKAA2P54646 552 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 RPS8P62241 208 aaKnown RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PHKG1Q16816 387 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 KLHL12Q53G59 568 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 SLC10A5Q5PT55 438 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 SNX30Q5VWJ9 437 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 FRMD5Q7Z6J6 570 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 IFNL3Q8IZI9 196 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PROCA1Q8NCQ7 364 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 SMYD2Q9NRG4 433 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PI4KBQ9UBF8 816 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 ADAM21Q9UKJ8 722 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 NEURL1BA8MQ27 555 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 TCF3P15923 654 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 NCF2P19878 526 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 GARTP22102 1010 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 KRT76Q01546 638 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 KCNB1Q14721 858 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 TIMM50Q3ZCQ8 353 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 CLEC4GQ6UXB4 293 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 FASTKD5Q7L8L6 764 aaKnown RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 KRT27Q7Z3Y8 459 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 ULK2Q8IYT8 1036 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 ENGASEQ8NFI3 743 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 SERPINB12Q96P63 405 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 APOL4Q9BPW4 351 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 LRRC2Q9BYS8 371 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PTPN22Q9Y2R2 807 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 LRRC7Q96NW7 1537 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 CENPXA8MT69 81 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 P4HA2O15460 535 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 IFNA14P01570 189 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 MYCLP12524 364 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PPP4R4Q6NUP7 873 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PALB2Q86YC2 1186 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 NLRP4Q96MN2 994 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 NLRC4Q9NPP4 1024 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 ITIH6Q6UXX5 1313 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 KRT1P04264 644 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PNMA6AP0CW24 399 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 PLS3P13797 630 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 IL6STP40189 918 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 CASP2P42575 452 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 AARS2Q5JTZ9 985 aaKnown RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 AGBL2Q5U5Z8 902 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 HIBCHQ6NVY1 386 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-201ENST00000011700 AADATQ8N5Z0 425 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 ARL8AQ96BM9 186 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 FANCLQ9NW38 375 aa6.42□□□□□ -1.38
VPS13D-201ENST00000011700 KDM6AO15550 1401 aaPredicted RBP6.41□□□□□ -1.38
VPS13D-201ENST00000011700 PVALEFA0A1B0GWK0 134 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 AP1G2O75843 785 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 ZNF135P52742 658 aaPredicted RBP6.41□□□□□ -1.38
VPS13D-201ENST00000011700 EPHB1P54762 984 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 PLTPP55058 493 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 HPCAP84074 193 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 SNX17Q15036 470 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 ABCB5Q2M3G0 1257 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 ARMCX4Q5H9R4 360 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 TGS1Q96RS0 853 aaKnown RBP6.41□□□□□ -1.38
VPS13D-201ENST00000011700 GINM1Q9NU53 330 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 ZFATQ9P243 1243 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 PCDHA7Q9UN72 937 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 METP08581 1390 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 POTEFA5A3E0 1075 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 PSMD14O00487 310 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 GCP02774 474 aa6.41□□□□□ -1.38
VPS13D-201ENST00000011700 POTEIP0CG38 1075 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms