RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Bmp2P21274 394 aa16.09■□□□□ 0.17
Nup54-201ENSMUST00000038514 Etv6P97360 485 aa16.09■□□□□ 0.17
Nup54-201ENSMUST00000038514 Vwa3aQ3UVV9 1148 aa16.09■□□□□ 0.17
Nup54-201ENSMUST00000038514 Plk4Q64702 925 aa16.09■□□□□ 0.17
Nup54-201ENSMUST00000038514 Mageb18Q8BQR7 327 aa16.09■□□□□ 0.17
Nup54-201ENSMUST00000038514 PaoxQ8C0L6 504 aa16.09■□□□□ 0.17
Nup54-201ENSMUST00000038514 D630039A03RikQ8K0M7 236 aa16.09■□□□□ 0.17
Nup54-201ENSMUST00000038514 Nmrk1Q91W63 195 aa16.09■□□□□ 0.17
Nup54-201ENSMUST00000038514 Zmynd10Q99ML0 440 aa16.09■□□□□ 0.17
Nup54-201ENSMUST00000038514 Rasgrp1Q9Z1S3 795 aa16.09■□□□□ 0.17
Nup54-201ENSMUST00000038514 Gm45194A0A140LJG2 572 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Parp2O88554 559 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Oprl1P35377 367 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Ncf1Q09014 390 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Bpifb5Q3UQ05 490 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Rhbdf2Q80WQ6 827 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Trim65Q8BFW4 522 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 C130026I21RikQ8C898 291 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Slc26a6Q8CIW6 758 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Med24Q99K74 987 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Snx10Q9CWT3 201 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Nudt12Q9DCN1 462 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Krt17Q9QWL7 433 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Smok2bQ9QYZ3 484 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Smok2aQ9QYZ6 504 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 Klrc2Q9WTJ9 238 aa16.08■□□□□ 0.17
Nup54-201ENSMUST00000038514 DohhA0A1Y7VJ29 135 aa16.08■□□□□ 0.16
Nup54-201ENSMUST00000038514 Slc8a1P70414 970 aa16.08■□□□□ 0.16
Nup54-201ENSMUST00000038514 Taok1Q5F2E8 1001 aa16.08■□□□□ 0.16
Nup54-201ENSMUST00000038514 Elf1Q60775 612 aa16.08■□□□□ 0.16
Nup54-201ENSMUST00000038514 Styk1Q6J9G1 429 aa16.08■□□□□ 0.16
Nup54-201ENSMUST00000038514 Q8C6G1 249 aa16.08■□□□□ 0.16
Nup54-201ENSMUST00000038514 Spire2Q8K1S6 718 aa16.08■□□□□ 0.16
Nup54-201ENSMUST00000038514 Vps36Q91XD6 386 aa16.08■□□□□ 0.16
Nup54-201ENSMUST00000038514 Cep85lA0A1W2P884 806 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Slc16a2O70324 545 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Diaph2O70566 1098 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 IvlP48997 467 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Creb1Q01147 341 aaKnown RBP16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Mier3Q3UHF3 551 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 SpopQ6ZWS8 374 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Zswim5Q80TC6 1188 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Calhm4Q8CE93 315 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Q99KU6 348 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Rnf225Q9D7D1 332 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ccdc124Q9D8X2 217 aaKnown RBP16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Dgcr8Q9EQM6 773 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Znf394Q9Z1D9 521 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Bcorl1A2AQH4 1781 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 MyocO70624 490 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Casp14O89094 257 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Akr1b8P45377 316 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Frg1P97376 258 aaKnown RBP16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Pbxip1Q3TVI8 727 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 MaeaQ4VC33 396 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 WlsQ6DID7 541 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ntrk3Q6VNS1 825 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Tmem117Q8BH18 514 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Rell1Q8K2J7 272 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Lrrc14Q8VC16 493 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 NcaldQ91X97 193 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 WaslQ91YD9 501 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Gtf2ird1Q9JI57 1104 aaKnown RBP16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Rfwd2Q9R1A8 733 aaKnown RBP16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Itgb4A2A863 1818 aa16.07■□□□□ 0.16
Nup54-201ENSMUST00000038514 Scn3aA2ASI5 1947 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Myo1eE9Q634 1107 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Serpinb6eI7HJI3 429 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Prl6a1O35257 230 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 GckP52792 465 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Wdr41Q3UDP0 460 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Tbc1d1Q60949 1255 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Zcchc2Q69ZB8 1166 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Churc1Q6DG52 112 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Hspbp1Q99P31 357 aaKnown RBP16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Chchd3Q9CRB9 227 aaKnown RBP16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Orc3Q9JK30 715 aaKnown RBP16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Adam22Q9R1V6 904 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Kcnk16G5E845 292 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 InhbeO08717 350 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ephb2P54763 986 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Gja5Q01231 358 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Tmem120bQ3TA38 339 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Tigd5Q499M4 642 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Atp13a3Q5XF89 1219 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Brd2Q7JJ13 798 aaKnown RBP16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Vgll2Q8BGW8 322 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Kiaa0391Q8JZY4 584 aaKnown RBP16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Gprc5cQ8K3J9 440 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Fkbp6Q91XW8 327 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 4921524L21RikQ9D5T2 438 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Capn12Q9ER56 720 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 Cyp2ab1S4R196 498 aa16.06■□□□□ 0.16
Nup54-201ENSMUST00000038514 C87977A2A958 498 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Gpr161B2RPY5 545 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Srsf11E9Q6E5 511 aaKnown RBP16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Slc27a3O88561 667 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 LipeP54310 759 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 rp9P97762 213 aa16.05■□□□□ 0.16
Nup54-201ENSMUST00000038514 Spata18Q0P557 537 aa16.05■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms