RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Itgb5O70309 798 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 IvlP48997 467 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 OgdhQ60597 1023 aaKnown RBP17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Msantd2Q6NZR2 559 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 NrcamQ810U4 1256 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Sun2Q8BJS4 731 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Mis12Q9CY25 206 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Cntnap5cQ0V8T7 1305 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Mmrn1B2RPV6 1210 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Cfap70D3YVL2 1141 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Sstr3P30935 428 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Ppp3caP63328 521 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Agbl1Q09M05 972 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Cracr2aQ3UP38 310 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Ppp2r5aQ6PD03 486 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Rusc1Q8BG26 893 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 AsphQ8BSY0 741 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Proser2Q8C5R2 471 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Ccdc15Q8C9M2 810 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Abcf3Q8K268 709 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Champ1Q8K327 802 aaKnown RBP17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Atp2a1Q8R429 994 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Nmrk1Q91W63 195 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Synpo2Q91YE8 1087 aaKnown RBP17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Rnf4Q9QZS2 194 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Rfwd2Q9R1A8 733 aaKnown RBP17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Osbpl7A2A716 963 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Dhx15O35286 795 aaKnown RBP17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Rit2P70425 217 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Trim37Q6PCX9 961 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Slc9c1Q6UJY2 1175 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Nucks1Q80XU3 234 aaKnown RBP17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Slc17a8Q8BFU8 601 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Enoph1Q8BGB7 257 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Lmo3Q8BZL8 145 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Tmem120aQ8C1E7 343 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Ccdc65Q8VHI7 493 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 CactinQ9CS00 772 aaKnown RBP17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Astn1Q61137 1302 aa17.64■□□□□ 0.41
Shh-201ENSMUST00000002708 Prl6a1O35257 230 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 UgcgO88693 394 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Frmd8Q3UFK8 466 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Tbc1d1Q60949 1255 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Sorbs1Q62417 1290 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Stambpl1Q76N33 436 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Kiaa0391Q8JZY4 584 aaKnown RBP17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Mcur1Q9CXD6 340 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Cfap53Q9D439 514 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Tlr5Q9JLF7 859 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Znf394Q9Z1D9 521 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Serpinb6cW4VSP4 379 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Pagr1bF6V0H0 108 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Cdk14O35495 469 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Tagap1P0CAX8 505 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Kif5cP28738 956 aaKnown RBP17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 LxnP70202 222 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Ppp1r13bQ62415 1087 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Fgfr1opQ66JX5 399 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Adat2Q6P6J0 191 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Pgrmc2Q80UU9 217 aaKnown RBP17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Atg4cQ811C2 458 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Depdc1bQ8BH88 529 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Agap1Q8BXK8 857 aaKnown RBP17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Pop1Q8K205 1045 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 SfpqQ8VIJ6 699 aaKnown RBP17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Pagr1aQ99L02 253 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Cdca7Q9D0M2 382 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Extl3Q9WVL6 918 aa17.63■□□□□ 0.41
Shh-201ENSMUST00000002708 Pdk4O70571 412 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 R3hdm4Q4VBF2 262 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Klra6Q60653 266 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Raver2Q7TPD6 673 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Q8BGD0 127 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Bicd1Q8BR07 835 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Tti1Q91V83 1085 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Ccdc124Q9D8X2 217 aaKnown RBP17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Ccdc182Q9D9C6 152 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Calb1P12658 261 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Trim65Q8BFW4 522 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Fam118bQ8C569 351 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Cd2bp2Q9CWK3 342 aaKnown RBP17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Mia3Q8BI84 1930 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Cacna1fQ9JIS7 1985 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 DgkkE9Q7N4 1118 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Adcy7P51829 1099 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Eepd1Q3TGW2 569 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Elf1Q60775 612 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Ppp1r1bQ60829 194 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Pcdhb12Q91Y07 789 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Cep19Q9CQA8 163 aa17.62■□□□□ 0.41
Shh-201ENSMUST00000002708 Pik3caP42337 1068 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Wnt10bP48614 389 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Rhox12Q4TU81 186 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Psen2Q61144 448 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Pkn2Q8BWW9 983 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Hspbp1Q99P31 357 aaKnown RBP17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 YwhabQ9CQV8 246 aaKnown RBP17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Sdr42e1Q9D665 394 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Net1Q9Z206 595 aa17.61■□□□□ 0.41
Shh-201ENSMUST00000002708 Gm4758L7N258 96 aa17.61■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 75.8 ms