RNA–Protein interactions for RNA: YLR192C

HCR1, Transcript of eIF3j component of translation initiation factor 3 (eIF3), yeast

Gene HCR1, Length 798 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCR1	YLR192C	REX3	Q12090	404 aa		5.2	□□□□□ -1.58
HCR1	YLR192C	YOR019W	Q99248	730 aa		5.2	□□□□□ -1.58
HCR1	YLR192C	RPL7A	P05737	244 aa	Known RBP	5.19	□□□□□ -1.58
HCR1	YLR192C	NFT1	P0CE68	1218 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	HOM3	P10869	527 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	CBS1	P14066	229 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	RPL24B	P24000	155 aa	Known RBP	5.19	□□□□□ -1.58
HCR1	YLR192C	CHA1	P25379	360 aa	Known RBP	5.19	□□□□□ -1.58
HCR1	YLR192C	PBN1	P25580	416 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	YIM1	P28625	365 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
HCR1	YLR192C	YOR062C	P36025	268 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	IFA38	P38286	347 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	SBE22	P38814	852 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	MDM31	P38880	579 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	MET28	P40573	187 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	TAX4	P47030	604 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	JHD2	P47156	728 aa	Predicted RBP	5.19	□□□□□ -1.58
HCR1	YLR192C	ABZ2	Q03266	374 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	HOF1	Q05080	669 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	PEX10	Q05568	337 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	YOR365C	Q08844	703 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	RCN2	Q12044	265 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	SIA1	Q12212	622 aa		5.19	□□□□□ -1.58
HCR1	YLR192C	RPL7B	Q12213	244 aa	Known RBP	5.19	□□□□□ -1.58
HCR1	YLR192C	YOR097C	Q12274	175 aa	Predicted RBP	5.19	□□□□□ -1.58
HCR1	YLR192C	MDM10	P18409	493 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	APN1	P22936	367 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	YCR006C	P25350	157 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	OAC1	P32332	324 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	GSH1	P32477	678 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	GPX2	P38143	162 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	ICE2	P40499	491 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	YIL067C	P40514	678 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	APS3	P47064	194 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	HOS2	P53096	452 aa	Predicted RBP	5.18	□□□□□ -1.58
HCR1	YLR192C	CDH1	P53197	566 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	TPS1	Q00764	495 aa	Known RBP	5.18	□□□□□ -1.58
HCR1	YLR192C	SNZ1	Q03148	297 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	MAK3	Q03503	176 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	THP3	Q12049	470 aa	Known RBP	5.18	□□□□□ -1.58
HCR1	YLR192C	YOR214C	Q12282	236 aa		5.18	□□□□□ -1.58
HCR1	YLR192C	STT4	P37297	1900 aa		5.17	□□□□□ -1.58
HCR1	YLR192C	RPC40	P07703	335 aa	Known RBP	5.17	□□□□□ -1.58
HCR1	YLR192C	SEC12	P11655	471 aa		5.17	□□□□□ -1.58
HCR1	YLR192C	RPS27A	P35997	82 aa	Known RBP	5.17	□□□□□ -1.58
HCR1	YLR192C	RPS27B	P38711	82 aa		5.17	□□□□□ -1.58
HCR1	YLR192C	YHR035W	P38769	630 aa		5.17	□□□□□ -1.58
HCR1	YLR192C	PCL6	P40038	420 aa		5.17	□□□□□ -1.58
HCR1	YLR192C	YIL152W	P40455	235 aa		5.17	□□□□□ -1.58
HCR1	YLR192C	ALK1	P43633	760 aa	Known RBP	5.17	□□□□□ -1.58
HCR1	YLR192C	MPC1	P53157	130 aa	Known RBP	5.17	□□□□□ -1.58
HCR1	YLR192C	FIN1	Q03898	291 aa		5.17	□□□□□ -1.58
HCR1	YLR192C	YMR087W	Q04299	284 aa		5.17	□□□□□ -1.58
HCR1	YLR192C	RNH202	Q05635	350 aa		5.17	□□□□□ -1.58
HCR1	YLR192C	VID22	Q05934	901 aa		5.17	□□□□□ -1.58
HCR1	YLR192C	DCI1	Q08558	271 aa		5.17	□□□□□ -1.58
HCR1	YLR192C	TGS1	Q12052	315 aa		5.17	□□□□□ -1.58
HCR1	YLR192C	AQY1	P0CD91	305 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	YOL163W	P0CF20	169 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	CAP2	P13517	287 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	DAL82	P21705	255 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	PTC6	P25646	442 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	PMT2	P31382	759 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	ORC2	P32833	620 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	RCN1	P36054	211 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	TUL1	P36096	758 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	VPS51	P36116	164 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	IPI1	P38803	334 aa	Predicted RBP	5.16	□□□□□ -1.58
HCR1	YLR192C	NVJ1	P38881	321 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	VPS52	P39904	641 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	GDI1	P39958	451 aa	Known RBP	5.16	□□□□□ -1.58
HCR1	YLR192C	RTT105	P40063	208 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	SPG5	P42933	373 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	SER2	P42941	309 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	YFL015C	P43578	164 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	IRC7	P43623	340 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	ALB1	P47019	175 aa	Predicted RBP	5.16	□□□□□ -1.58
HCR1	YLR192C	UBX6	P47049	396 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	NUP57	P48837	541 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	CWC23	P52868	283 aa	Predicted RBP	5.16	□□□□□ -1.58
HCR1	YLR192C	ARO8	P53090	500 aa	Known RBP	5.16	□□□□□ -1.58
HCR1	YLR192C	YPR174C	Q06616	221 aa	Predicted RBP	5.16	□□□□□ -1.58
HCR1	YLR192C	UIP4	Q08926	304 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	RKM1	Q08961	583 aa	Predicted RBP	5.16	□□□□□ -1.58
HCR1	YLR192C	APC2	Q12440	853 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	SKS1	Q12505	502 aa		5.16	□□□□□ -1.58
HCR1	YLR192C	SLH1	P53327	1967 aa	Known RBP	5.15	□□□□□ -1.58
HCR1	YLR192C	RPL6B	P05739	176 aa	Known RBP	5.15	□□□□□ -1.59
HCR1	YLR192C	GLK1	P17709	500 aa	Known RBP	5.15	□□□□□ -1.59
HCR1	YLR192C	SNF6	P18888	332 aa		5.15	□□□□□ -1.59
HCR1	YLR192C	ARO7	P32178	256 aa		5.15	□□□□□ -1.59
HCR1	YLR192C	PTR2	P32901	601 aa		5.15	□□□□□ -1.59
HCR1	YLR192C	SUR1	P33300	382 aa		5.15	□□□□□ -1.59
HCR1	YLR192C	YBR063C	P38083	404 aa		5.15	□□□□□ -1.59
HCR1	YLR192C	MBA1	P38300	278 aa		5.15	□□□□□ -1.59
HCR1	YLR192C	YAE1	P47118	141 aa	Predicted RBP	5.15	□□□□□ -1.59
HCR1	YLR192C	TRM9	P49957	279 aa		5.15	□□□□□ -1.59
HCR1	YLR192C	IMD4	P50094	524 aa	Known RBP	5.15	□□□□□ -1.59
HCR1	YLR192C	LSG1	P53145	640 aa	Known RBP	5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms