RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W SLM1P40485 686 aa2.53□□□□□ -2
SEC4YFL005W AGP3P43548 558 aa2.53□□□□□ -2
SEC4YFL005W MND1P53102 219 aa2.53□□□□□ -2
SEC4YFL005W YMR244WQ04018 355 aa2.53□□□□□ -2
SEC4YFL005W BER1Q06688 274 aaKnown RBP2.53□□□□□ -2
SEC4YFL005W VIK1Q12045 647 aa2.53□□□□□ -2
SEC4YFL005W RRP42Q12277 265 aaPredicted RBP2.53□□□□□ -2
SEC4YFL005W ERP3Q12403 225 aa2.53□□□□□ -2
SEC4YFL005W FUS3P16892 353 aaKnown RBP2.52□□□□□ -2.01
SEC4YFL005W CKA2P19454 339 aa2.52□□□□□ -2.01
SEC4YFL005W COX10P21592 462 aa2.52□□□□□ -2.01
SEC4YFL005W IMP3P32899 183 aaPredicted RBP2.52□□□□□ -2.01
SEC4YFL005W ZRT3P34240 503 aa2.52□□□□□ -2.01
SEC4YFL005W RPC37P36121 282 aa2.52□□□□□ -2.01
SEC4YFL005W TDA11P38854 504 aa2.52□□□□□ -2.01
SEC4YFL005W YIL054WP40524 105 aa2.52□□□□□ -2.01
SEC4YFL005W GDS1P41913 522 aa2.52□□□□□ -2.01
SEC4YFL005W YNL050CP53952 270 aa2.52□□□□□ -2.01
SEC4YFL005W GMC1Q04399 608 aa2.52□□□□□ -2.01
SEC4YFL005W GPN3Q06543 272 aa2.52□□□□□ -2.01
SEC4YFL005W ASR1Q06834 288 aa2.52□□□□□ -2.01
SEC4YFL005W YOR292CQ08743 309 aa2.52□□□□□ -2.01
SEC4YFL005W YDL012CQ12489 107 aa2.52□□□□□ -2.01
SEC4YFL005W YPR064WQ12492 139 aa2.52□□□□□ -2.01
SEC4YFL005W DFM1Q12743 341 aaKnown RBP2.52□□□□□ -2.01
SEC4YFL005W SSA3P09435 649 aaKnown RBP2.51□□□□□ -2.01
SEC4YFL005W FRS2P15625 503 aaKnown RBP2.51□□□□□ -2.01
SEC4YFL005W ICL1P28240 557 aaPredicted RBP2.51□□□□□ -2.01
SEC4YFL005W FRM2P37261 193 aa2.51□□□□□ -2.01
SEC4YFL005W MRX8Q05473 314 aa2.51□□□□□ -2.01
SEC4YFL005W ECM19Q06011 112 aa2.51□□□□□ -2.01
SEC4YFL005W DIB1Q06819 143 aaPredicted RBP2.51□□□□□ -2.01
SEC4YFL005W TRM10Q12400 293 aa2.51□□□□□ -2.01
SEC4YFL005W TFC7Q12415 435 aa2.51□□□□□ -2.01
SEC4YFL005W FMP16Q12497 93 aa2.51□□□□□ -2.01
SEC4YFL005W FLO11P08640 1367 aa2.5□□□□□ -2.01
SEC4YFL005W VPH2P32341 215 aa2.5□□□□□ -2.01
SEC4YFL005W GPX1P36014 167 aa2.5□□□□□ -2.01
SEC4YFL005W TPO5P36029 618 aa2.5□□□□□ -2.01
SEC4YFL005W FRT2P39734 528 aa2.5□□□□□ -2.01
SEC4YFL005W VAB2P40003 282 aa2.5□□□□□ -2.01
SEC4YFL005W SHQ1P40486 507 aaPredicted RBP2.5□□□□□ -2.01
SEC4YFL005W YPT32P51996 222 aaKnown RBP2.5□□□□□ -2.01
SEC4YFL005W YGL118CP53132 145 aa2.5□□□□□ -2.01
SEC4YFL005W SEC13Q04491 297 aaKnown RBP2.5□□□□□ -2.01
SEC4YFL005W PRP46Q12417 451 aaPredicted RBP2.5□□□□□ -2.01
SEC4YFL005W TFS1P14306 219 aa2.49□□□□□ -2.01
SEC4YFL005W GCG1P32656 232 aaKnown RBP2.49□□□□□ -2.01
SEC4YFL005W CDC13P32797 924 aaKnown RBP2.49□□□□□ -2.01
SEC4YFL005W SKG6P32900 734 aaPredicted RBP2.49□□□□□ -2.01
SEC4YFL005W MRPL6P32904 214 aa2.49□□□□□ -2.01
SEC4YFL005W AIM29P36154 155 aa2.49□□□□□ -2.01
SEC4YFL005W YBR062CP38239 180 aa2.49□□□□□ -2.01
SEC4YFL005W TRR2P38816 342 aa2.49□□□□□ -2.01
SEC4YFL005W BDH1P39714 382 aa2.49□□□□□ -2.01
SEC4YFL005W RPN14P53196 417 aa2.49□□□□□ -2.01
SEC4YFL005W HST4P53688 370 aa2.49□□□□□ -2.01
SEC4YFL005W VTI1Q04338 217 aa2.49□□□□□ -2.01
SEC4YFL005W PEX30Q06169 523 aa2.49□□□□□ -2.01
SEC4YFL005W TAZ1Q06510 381 aa2.49□□□□□ -2.01
SEC4YFL005W IES4Q08561 116 aa2.49□□□□□ -2.01
SEC4YFL005W RRP36Q12481 300 aaPredicted RBP2.49□□□□□ -2.01
SEC4YFL005W ILV1P00927 576 aaKnown RBP2.48□□□□□ -2.01
SEC4YFL005W DAL81P21657 970 aa2.48□□□□□ -2.01
SEC4YFL005W RPB9P27999 122 aa2.48□□□□□ -2.01
SEC4YFL005W SPT4P32914 102 aaPredicted RBP2.48□□□□□ -2.01
SEC4YFL005W RIB7P33312 244 aa2.48□□□□□ -2.01
SEC4YFL005W PET100P38958 111 aa2.48□□□□□ -2.01
SEC4YFL005W ASP1P38986 381 aaPredicted RBP2.48□□□□□ -2.01
SEC4YFL005W YIA6P40556 373 aa2.48□□□□□ -2.01
SEC4YFL005W YFL064CP43540 174 aa2.48□□□□□ -2.01
SEC4YFL005W FMP33P46998 180 aa2.48□□□□□ -2.01
SEC4YFL005W MRX5P47007 382 aa2.48□□□□□ -2.01
SEC4YFL005W EMC2P47133 292 aaKnown RBP2.48□□□□□ -2.01
SEC4YFL005W CAX4P53223 239 aa2.48□□□□□ -2.01
SEC4YFL005W RNY1Q02933 434 aaKnown RBP2.48□□□□□ -2.01
SEC4YFL005W YDL211CQ12121 372 aa2.48□□□□□ -2.01
SEC4YFL005W POM33Q12164 279 aa2.48□□□□□ -2.01
SEC4YFL005W CUP2P15315 225 aa2.47□□□□□ -2.01
SEC4YFL005W DAL5P15365 543 aa2.47□□□□□ -2.01
SEC4YFL005W CPT1P17898 393 aa2.47□□□□□ -2.01
SEC4YFL005W YSR3P23501 404 aa2.47□□□□□ -2.01
SEC4YFL005W AEP1P32493 518 aa2.47□□□□□ -2.01
SEC4YFL005W EDC2P40023 145 aaPredicted RBP2.47□□□□□ -2.01
SEC4YFL005W LIF1P53150 421 aa2.47□□□□□ -2.01
SEC4YFL005W ACT1P60010 375 aaKnown RBP2.47□□□□□ -2.01
SEC4YFL005W SMD1Q02260 146 aaPredicted RBP2.47□□□□□ -2.01
SEC4YFL005W ARC18Q05933 178 aaKnown RBP2.47□□□□□ -2.01
SEC4YFL005W YPL278CQ08990 100 aa2.47□□□□□ -2.01
SEC4YFL005W TDH1P00360 332 aaKnown RBP2.46□□□□□ -2.02
SEC4YFL005W TPS2P31688 896 aaKnown RBP2.46□□□□□ -2.02
SEC4YFL005W MBA1P38300 278 aa2.46□□□□□ -2.02
SEC4YFL005W YIR035CP40579 254 aa2.46□□□□□ -2.02
SEC4YFL005W TPN1P53099 579 aa2.46□□□□□ -2.02
SEC4YFL005W CPD1P53314 239 aa2.46□□□□□ -2.02
SEC4YFL005W SPP2Q02521 185 aa2.46□□□□□ -2.02
SEC4YFL005W YMR209CQ03648 457 aa2.46□□□□□ -2.02
SEC4YFL005W YML018CQ03730 393 aa2.46□□□□□ -2.02
SEC4YFL005W TAF9Q05027 157 aa2.46□□□□□ -2.02
SEC4YFL005W DPP1Q05521 289 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms