RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 YOR289WQ12012 251 aaPredicted RBP12.96□□□□□ -0.33
SCR1SCR1 LSO1Q3E827 93 aa12.96□□□□□ -0.33
SCR1SCR1 STE50P25344 346 aa12.95□□□□□ -0.34
SCR1SCR1 PPA2P28239 310 aa12.95□□□□□ -0.34
SCR1SCR1 ECM8P38246 354 aa12.95□□□□□ -0.34
SCR1SCR1 YBR096WP38256 230 aa12.95□□□□□ -0.34
SCR1SCR1 HOT1Q03213 719 aa12.95□□□□□ -0.34
SCR1SCR1 YDL114WQ07530 308 aa12.95□□□□□ -0.34
SCR1SCR1 NFT1P0CE68 1218 aa12.94□□□□□ -0.34
SCR1SCR1 RPS16AP0CX51 143 aaKnown RBP12.94□□□□□ -0.34
SCR1SCR1 RPS16BP0CX52 143 aaKnown RBP12.94□□□□□ -0.34
SCR1SCR1 PEP12P32854 288 aa12.94□□□□□ -0.34
SCR1SCR1 AHP1P38013 176 aaKnown RBP12.94□□□□□ -0.34
SCR1SCR1 YFL051CP43552 160 aa12.94□□□□□ -0.34
SCR1SCR1 PET191Q02772 108 aa12.94□□□□□ -0.34
SCR1SCR1 OST6Q03723 332 aa12.94□□□□□ -0.34
SCR1SCR1 AGE1Q04412 482 aa12.94□□□□□ -0.34
SCR1SCR1 YPR097WQ06839 1073 aa12.94□□□□□ -0.34
SCR1SCR1 NCE102Q12207 173 aaRIP-Chip data12.94□□□□□ -0.34not detected
SCR1SCR1 SAM35P14693 329 aa12.93□□□□□ -0.34
SCR1SCR1 CLB2P24869 491 aa12.93□□□□□ -0.34
SCR1SCR1 OAC1P32332 324 aa12.93□□□□□ -0.34
SCR1SCR1 PHO90P39535 881 aa12.93□□□□□ -0.34
SCR1SCR1 SLZ1P40167 298 aa12.93□□□□□ -0.34
SCR1SCR1 HIS6P40545 261 aa12.93□□□□□ -0.34
SCR1SCR1 YNL165WP53891 406 aa12.93□□□□□ -0.34
SCR1SCR1 YMD8Q03697 442 aa12.93□□□□□ -0.34
SCR1SCR1 MEU1Q07938 337 aaKnown RBP RIP-Chip data12.93□□□□□ -0.34not detected
SCR1SCR1 ACF2Q12168 779 aa12.93□□□□□ -0.34
SCR1SCR1 NAB2P32505 525 aaKnown RBP RIP-Chip data12.92□□□□□ -0.34not detected
SCR1SCR1 SSE2P32590 693 aaKnown RBP12.92□□□□□ -0.34
SCR1SCR1 SFH5P47008 294 aa12.92□□□□□ -0.34
SCR1SCR1 SIP18P50263 79 aa12.92□□□□□ -0.34
SCR1SCR1 YDR387CQ04162 555 aa12.92□□□□□ -0.34
SCR1SCR1 VPH2P32341 215 aa12.91□□□□□ -0.34
SCR1SCR1 YBR220CP38318 560 aa12.91□□□□□ -0.34
SCR1SCR1 YER084WP40057 128 aa12.91□□□□□ -0.34
SCR1SCR1 NQM1P53228 333 aaPredicted RBP12.91□□□□□ -0.34
SCR1SCR1 MAL12P53341 584 aa12.91□□□□□ -0.34
SCR1SCR1 MNT4P53745 580 aa12.91□□□□□ -0.34
SCR1SCR1 PGA1P53896 198 aa12.91□□□□□ -0.34
SCR1SCR1 SNZ1Q03148 297 aa12.91□□□□□ -0.34
SCR1SCR1 PML1Q07930 204 aaPredicted RBP12.91□□□□□ -0.34
SCR1SCR1 YLR040CQ07988 224 aa12.91□□□□□ -0.34
SCR1SCR1 PCL9Q12477 304 aa12.91□□□□□ -0.34
SCR1SCR1 MRPS5P33759 307 aa12.9□□□□□ -0.34
SCR1SCR1 QRI7P43122 407 aa12.9□□□□□ -0.34
SCR1SCR1 NIT3P49954 291 aa12.9□□□□□ -0.34
SCR1SCR1 IPK1Q06667 281 aa12.9□□□□□ -0.34
SCR1SCR1 SED4P25365 1065 aa12.89□□□□□ -0.35
SCR1SCR1 SRP102P36057 244 aaPredicted RBP12.89□□□□□ -0.35
SCR1SCR1 ECM1P39715 212 aa12.89□□□□□ -0.35
SCR1SCR1 TIM10P87108 93 aa12.89□□□□□ -0.35
SCR1SCR1 TAZ1Q06510 381 aa12.89□□□□□ -0.35
SCR1SCR1 SYC1Q08553 188 aaPredicted RBP12.89□□□□□ -0.35
SCR1SCR1 IZH2Q12442 317 aa12.89□□□□□ -0.35
SCR1SCR1 RRI1Q12468 440 aa12.89□□□□□ -0.35
SCR1SCR1 RET2P43621 546 aa12.88□□□□□ -0.35
SCR1SCR1 LAP3Q01532 483 aaKnown RBP RIP-Chip data12.88□□□□□ -0.35not detected
SCR1SCR1 MCH4Q08268 501 aa12.88□□□□□ -0.35
SCR1SCR1 YPL119C-AQ3E751 87 aa12.88□□□□□ -0.35
SCR1SCR1 SCEIP03882 235 aa12.87□□□□□ -0.35
SCR1SCR1 OPI3P05375 206 aa12.87□□□□□ -0.35
SCR1SCR1 KRR1P25586 316 aaPredicted RBP12.87□□□□□ -0.35
SCR1SCR1 PRP21P32524 280 aaPredicted RBP12.87□□□□□ -0.35
SCR1SCR1 YLF2P38746 405 aa12.87□□□□□ -0.35
SCR1SCR1 BUD17P53727 317 aa12.87□□□□□ -0.35
SCR1SCR1 NUP49Q02199 472 aa12.87□□□□□ -0.35
SCR1SCR1 YMR099CQ03161 297 aaKnown RBP12.87□□□□□ -0.35
SCR1SCR1 YMR315WQ04869 349 aaKnown RBP12.87□□□□□ -0.35
SCR1SCR1 NNT1Q05874 261 aa12.87□□□□□ -0.35
SCR1SCR1 YBL029C-AQ3E756 94 aa12.87□□□□□ -0.35
SCR1SCR1 VCX1Q99385 411 aa12.87□□□□□ -0.35
SCR1SCR1 PDA1P16387 420 aaKnown RBP12.86□□□□□ -0.35
SCR1SCR1 CPR2P23285 205 aa12.86□□□□□ -0.35
SCR1SCR1 RSM22P36056 628 aa12.86□□□□□ -0.35
SCR1SCR1 TNA1P53322 534 aa12.86□□□□□ -0.35
SCR1SCR1 RRP9Q06506 573 aaKnown RBP12.86□□□□□ -0.35
SCR1SCR1 RTN2Q12443 393 aa12.86□□□□□ -0.35
SCR1SCR1 YCL002CP25565 263 aa12.85□□□□□ -0.35
SCR1SCR1 PIG2P40187 538 aa12.85□□□□□ -0.35
SCR1SCR1 YLR345WQ06137 509 aa12.85□□□□□ -0.35
SCR1SCR1 FIT3Q08907 204 aa12.85□□□□□ -0.35
SCR1SCR1 PST2Q12335 198 aaKnown RBP12.85□□□□□ -0.35
SCR1SCR1 YGR161W-CQ3E744 92 aa12.85□□□□□ -0.35
SCR1SCR1 SPO24Q3E752 67 aa12.85□□□□□ -0.35
SCR1SCR1 IDP1P21954 428 aaKnown RBP12.84□□□□□ -0.35
SCR1SCR1 DBF20P32328 564 aa12.84□□□□□ -0.35
SCR1SCR1 YBR063CP38083 404 aa12.84□□□□□ -0.35
SCR1SCR1 GDS1P41913 522 aa12.84□□□□□ -0.35
SCR1SCR1 PFS2P42841 465 aaKnown RBP12.84□□□□□ -0.35
SCR1SCR1 INN1P53901 409 aa12.84□□□□□ -0.35
SCR1SCR1 ARP10Q04549 284 aa12.84□□□□□ -0.35
SCR1SCR1 AIM6Q07716 390 aa12.84□□□□□ -0.35
SCR1SCR1 MCT1Q12283 360 aa12.84□□□□□ -0.35
SCR1SCR1 UTP20P35194 2493 aaKnown RBP12.84□□□□□ -0.35
SCR1SCR1 YGL041W-AP0C5N3 154 aa12.83□□□□□ -0.36
SCR1SCR1 ERG4P25340 473 aa12.83□□□□□ -0.36
SCR1SCR1 FUN19P28003 413 aaPredicted RBP12.83□□□□□ -0.36
SCR1SCR1 SUR1P33300 382 aa12.83□□□□□ -0.36
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms