RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 NAMPTP43490 491 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 UBE3AQ05086 875 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 RESTQ13127 1097 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 PPP2R5AQ15172 486 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 NOMO2Q5JPE7 1267 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 KCNT2Q6UVM3 1135 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 AGMOQ6ZNB7 445 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 KCNK18Q7Z418 384 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 CNNM3Q8NE01 707 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
PHGDH-231ENST00000641939 CDK5RAP3Q96JB5 506 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 IFT74Q96LB3 600 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 PRIMPOLQ96LW4 560 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 ZNF558Q96NG5 402 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 CSRNP2Q9H175 543 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 UBE2ZQ9H832 354 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-231ENST00000641939 PRMT7Q9NVM4 692 aaPredicted RBP16.63■□□□□ 0.25
PHGDH-231ENST00000641939 MTMR6Q9Y217 621 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 CNTNAP2Q9UHC6 1331 aa16.63■□□□□ 0.25
PHGDH-231ENST00000641939 BDP1A6H8Y1 2624 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-231ENST00000641939 B4GALT5O43286 388 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 SLC26A4O43511 780 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 STX6O43752 255 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 PPM1AP35813 382 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 LONP1P36776 959 aaKnown RBP16.62■□□□□ 0.25
PHGDH-231ENST00000641939 PLCB3Q01970 1234 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 FAM187BQ17R55 369 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 SMG8Q8ND04 991 aaKnown RBP16.62■□□□□ 0.25
PHGDH-231ENST00000641939 PNMA5Q96PV4 448 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 EIF2AQ9BY44 585 aaKnown RBP16.62■□□□□ 0.25
PHGDH-231ENST00000641939 FZD8Q9H461 694 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 RSAD1Q9HA92 442 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 POLD4Q9HCU8 107 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 TBC1D13Q9NVG8 400 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 INPP5FQ9Y2H2 1132 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 IPPQ9Y573 584 aa16.62■□□□□ 0.25
PHGDH-231ENST00000641939 A0A1B0GUA9 196 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 NCK2O43639 380 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 ITGA4P13612 1032 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 PBX3P40426 434 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 UBA7P41226 1012 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 MAPK6Q16659 721 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 TMEM119Q4V9L6 283 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 RINT1Q6NUQ1 792 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 SLC27A1Q6PCB7 646 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 C1orf186Q6ZWK4 172 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 CABP7Q86V35 215 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 DEPTORQ8TB45 409 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 URGCPQ8TCY9 931 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 PPP2R3CQ969Q6 453 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 PLIN2Q99541 437 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 RUSC1Q9BVN2 902 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 TRIM6Q9C030 488 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-231ENST00000641939 ZSCAN16Q9H4T2 348 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-231ENST00000641939 UBN1Q9NPG3 1134 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 SPG21Q9NZD8 308 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 PUF60Q9UHX1 559 aaKnown RBP16.61■□□□□ 0.25
PHGDH-231ENST00000641939 LZTS1Q9Y250 596 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 CLIC4Q9Y696 253 aa16.61■□□□□ 0.25
PHGDH-231ENST00000641939 CARNS1A5YM72 827 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 HIP1RO75146 1068 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 SSBP05455 408 aaKnown RBP eCLIP16.6■□□□□ 0.25
PHGDH-231ENST00000641939 IRS1P35568 1242 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 ALDH7A1P49419 539 aaKnown RBP16.6■□□□□ 0.25
PHGDH-231ENST00000641939 KCNQ1P51787 676 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 BCAR1P56945 870 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 KRT17Q04695 432 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 GRIN1Q05586 938 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 RNASELQ05823 741 aaKnown RBP16.6■□□□□ 0.25
PHGDH-231ENST00000641939 COL19A1Q14993 1142 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 PTPAQ15257 358 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 FAM173BQ6P4H8 233 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 HACE1Q8IYU2 909 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 DAW1Q8N136 415 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 SYT2Q8N9I0 419 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-231ENST00000641939 MRPS27Q92552 414 aaKnown RBP16.6■□□□□ 0.25
PHGDH-231ENST00000641939 PABPC5Q96DU9 382 aaKnown RBP16.6■□□□□ 0.25
PHGDH-231ENST00000641939 CALML4Q96GE6 196 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 DRC1Q96MC2 740 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 TIPINQ9BVW5 301 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 CCDC113Q9H0I3 377 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 TLR9Q9NR96 1032 aa16.6■□□□□ 0.25
PHGDH-231ENST00000641939 TRIP11Q15643 1979 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 ACKR2O00590 384 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 ZC3H11AO75152 810 aaKnown RBP eCLIP16.59■□□□□ 0.25
PHGDH-231ENST00000641939 NPTXRO95502 500 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 PRKCBP05771 671 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 HSP90AA1P07900 732 aaKnown RBP16.59■□□□□ 0.25
PHGDH-231ENST00000641939 BMP1P13497 986 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 KCNA5P22460 613 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 EFNA5P52803 228 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 PEX3P56589 373 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 ERVFC1P60507 584 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 HYAL1Q12794 435 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 PRPF4BQ13523 1007 aaKnown RBP16.59■□□□□ 0.25
PHGDH-231ENST00000641939 PDE12Q6L8Q7 609 aaKnown RBP16.59■□□□□ 0.25
PHGDH-231ENST00000641939 CDR2LQ86X02 465 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-231ENST00000641939 SLC39A11Q8N1S5 342 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms