RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 LIG4P49917 911 aa19.17■□□□□ 0.66
PHGDH-230ENST00000641927 TLE2Q04725 743 aa19.17■□□□□ 0.66
PHGDH-230ENST00000641927 RBSNQ9H1K0 784 aa19.17■□□□□ 0.66
PHGDH-230ENST00000641927 PRMT7Q9NVM4 692 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-230ENST00000641927 SMTNL1A8MU46 457 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 GOLGA6L19H0YKK7 550 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 PDXKO00764 312 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 ERLIN2O94905 339 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 CD4P01730 458 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 CHRNA1P02708 482 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 IQCF3P0C7M6 154 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 DARSP14868 501 aaKnown RBP19.16■□□□□ 0.66
PHGDH-230ENST00000641927 FGFR4P22455 802 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 EIF4BP23588 611 aaKnown RBP19.16■□□□□ 0.66
PHGDH-230ENST00000641927 LRRC63Q05C16 580 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 PRPF4BQ13523 1007 aaKnown RBP19.16■□□□□ 0.66
PHGDH-230ENST00000641927 SNX17Q15036 470 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 TRIM71Q2Q1W2 868 aaKnown RBP19.16■□□□□ 0.66
PHGDH-230ENST00000641927 TTI2Q6NXR4 508 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 ANKRD33Q7Z3H0 272 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 IFNLR1Q8IU57 520 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-230ENST00000641927 DHX40Q8IX18 779 aaKnown RBP19.16■□□□□ 0.66
PHGDH-230ENST00000641927 CSGALNACT2Q8N6G5 542 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 CCDC155Q8N6L0 562 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 ENOX1Q8TC92 643 aaKnown RBP19.16■□□□□ 0.66
PHGDH-230ENST00000641927 EEF2KMTQ96G04 330 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 MED15Q96RN5 788 aa19.16■□□□□ 0.66
PHGDH-230ENST00000641927 TARS2Q9BW92 718 aaKnown RBP19.16■□□□□ 0.66
PHGDH-230ENST00000641927 MRPL4Q9BYD3 311 aaKnown RBP19.16■□□□□ 0.66
PHGDH-230ENST00000641927 TISP43B9A030 160 aa19.15■□□□□ 0.66
PHGDH-230ENST00000641927 CLIC2O15247 247 aa19.15■□□□□ 0.66
PHGDH-230ENST00000641927 TGFB1I1O43294 461 aa19.15■□□□□ 0.66
PHGDH-230ENST00000641927 CKBP12277 381 aa19.15■□□□□ 0.66
PHGDH-230ENST00000641927 MATR3P43243 847 aaKnown RBP eCLIP19.15■□□□□ 0.66
PHGDH-230ENST00000641927 IQCB1Q15051 598 aa19.15■□□□□ 0.66
PHGDH-230ENST00000641927 ZNF618Q5T7W0 954 aa19.15■□□□□ 0.66
PHGDH-230ENST00000641927 C1orf53Q5VUE5 145 aa19.15■□□□□ 0.66
PHGDH-230ENST00000641927 PPP4R3CPQ6ZMV5 832 aa19.15■□□□□ 0.66
PHGDH-230ENST00000641927 GOLGA5Q8TBA6 731 aa19.15■□□□□ 0.66
PHGDH-230ENST00000641927 TMEM40Q8WWA1 233 aa19.15■□□□□ 0.66
PHGDH-230ENST00000641927 FZD8Q9H461 694 aa19.15■□□□□ 0.66
PHGDH-230ENST00000641927 NFE2L3Q9Y4A8 694 aa19.15■□□□□ 0.66
PHGDH-230ENST00000641927 ACKR2O00590 384 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 B4GALT5O43286 388 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 CAND2O75155 1236 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 SFPQP23246 707 aaKnown RBP eCLIP19.14■□□□□ 0.66
PHGDH-230ENST00000641927 MGAT3Q09327 533 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 BFSP2Q13515 415 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 LRRC26Q2I0M4 334 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 ZCWPW2Q504Y3 356 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 SPATA1Q5VX52 437 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 CATSPER4Q7RTX7 472 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 CAGE1Q8TC20 777 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 KCNN1Q92952 543 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 AGPAT3Q9NRZ7 376 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 ANKFY1Q9P2R3 1169 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 TRAF3IP3Q9Y228 551 aa19.14■□□□□ 0.66
PHGDH-230ENST00000641927 ANKRD63C9JTQ0 380 aa19.14■□□□□ 0.65
PHGDH-230ENST00000641927 IKBKBO14920 756 aa19.14■□□□□ 0.65
PHGDH-230ENST00000641927 EDN1P05305 212 aa19.14■□□□□ 0.65
PHGDH-230ENST00000641927 NR2F2P24468 414 aa19.14■□□□□ 0.65
PHGDH-230ENST00000641927 TPM4P67936 248 aa19.14■□□□□ 0.65
PHGDH-230ENST00000641927 NCBP1Q09161 790 aaKnown RBP19.14■□□□□ 0.65
PHGDH-230ENST00000641927 FAAP100Q0VG06 881 aa19.14■□□□□ 0.65
PHGDH-230ENST00000641927 HSP90AA4PQ58FG1 418 aa19.14■□□□□ 0.65
PHGDH-230ENST00000641927 ARMCX5Q6P1M9 558 aa19.14■□□□□ 0.65
PHGDH-230ENST00000641927 NOC3LQ8WTT2 800 aaKnown RBP19.14■□□□□ 0.65
PHGDH-230ENST00000641927 PRIMPOLQ96LW4 560 aa19.14■□□□□ 0.65
PHGDH-230ENST00000641927 TOX2Q96NM4 488 aa19.14■□□□□ 0.65
PHGDH-230ENST00000641927 DUSP9Q99956 384 aaKnown RBP19.14■□□□□ 0.65
PHGDH-230ENST00000641927 TCHPQ9BT92 498 aa19.14■□□□□ 0.65
PHGDH-230ENST00000641927 SRRTQ9BXP5 876 aaKnown RBP19.14■□□□□ 0.65
PHGDH-230ENST00000641927 FANCLQ9NW38 375 aa19.14■□□□□ 0.65
PHGDH-230ENST00000641927 MKI67P46013 3256 aaKnown RBP19.13■□□□□ 0.65
PHGDH-230ENST00000641927 TTLL13PA6NNM8 815 aa19.13■□□□□ 0.65
PHGDH-230ENST00000641927 NR3C1P04150 777 aa19.13■□□□□ 0.65
PHGDH-230ENST00000641927 RPL13P26373 211 aaKnown RBP19.13■□□□□ 0.65
PHGDH-230ENST00000641927 CYP2J2P51589 502 aa19.13■□□□□ 0.65
PHGDH-230ENST00000641927 NCAPHQ15003 741 aa19.13■□□□□ 0.65
PHGDH-230ENST00000641927 FAM187BQ17R55 369 aa19.13■□□□□ 0.65
PHGDH-230ENST00000641927 EDRF1Q3B7T1 1238 aa19.13■□□□□ 0.65
PHGDH-230ENST00000641927 CREBRFQ8IUR6 639 aa19.13■□□□□ 0.65
PHGDH-230ENST00000641927 POMGNT1Q8WZA1 660 aa19.13■□□□□ 0.65
PHGDH-230ENST00000641927 NOC2LQ9Y3T9 749 aaKnown RBP19.13■□□□□ 0.65
PHGDH-230ENST00000641927 SIP14410 1827 aa19.13■□□□□ 0.65
PHGDH-230ENST00000641927 TSPAN1O60635 241 aa19.12■□□□□ 0.65
PHGDH-230ENST00000641927 RPS6KA5O75582 802 aa19.12■□□□□ 0.65
PHGDH-230ENST00000641927 GHRP10912 638 aa19.12■□□□□ 0.65
PHGDH-230ENST00000641927 SNRPFP62306 86 aaKnown RBP19.12■□□□□ 0.65
PHGDH-230ENST00000641927 FKBP3Q00688 224 aaKnown RBP19.12■□□□□ 0.65
PHGDH-230ENST00000641927 ADAM9Q13443 819 aa19.12■□□□□ 0.65
PHGDH-230ENST00000641927 AMHR2Q16671 573 aa19.12■□□□□ 0.65
PHGDH-230ENST00000641927 ATF7IP2Q5U623 682 aa19.12■□□□□ 0.65
PHGDH-230ENST00000641927 SLC39A4Q6P5W5 647 aa19.12■□□□□ 0.65
PHGDH-230ENST00000641927 ZPBP2Q6X784 338 aa19.12■□□□□ 0.65
PHGDH-230ENST00000641927 LRRC8DQ7L1W4 858 aa19.12■□□□□ 0.65
PHGDH-230ENST00000641927 ABHD8Q96I13 439 aa19.12■□□□□ 0.65
PHGDH-230ENST00000641927 CPB2Q96IY4 423 aa19.12■□□□□ 0.65
PHGDH-230ENST00000641927 ACO2Q99798 780 aaKnown RBP19.12■□□□□ 0.65
PHGDH-230ENST00000641927 CBWD1Q9BRT8 395 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 1048.8 ms