RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 MYO16Q9Y6X6 1858 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 KIAA1549LQ6ZVL6 1849 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 CYP3A7-CYP3A51PA0A087WV96 503 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 POTEMA6NI47 508 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 MSH4O15457 936 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 DHX15O43143 795 aaKnown RBP8.31□□□□□ -1.08
PHGDH-225ENST00000641720 LILRB3O75022 631 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 RPS6KA5O75582 802 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 EFEMP2O95967 443 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 ATP2B1P20020 1258 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 CYP3A7P24462 503 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 DDIT3P35638 169 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 ZNF76P36508 570 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 ACTR2P61160 394 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 GNL2Q13823 731 aaKnown RBP8.31□□□□□ -1.08
PHGDH-225ENST00000641720 PRR16Q569H4 304 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 RARS2Q5T160 578 aaKnown RBP8.31□□□□□ -1.08
PHGDH-225ENST00000641720 FOXD4L5Q5VV16 416 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-225ENST00000641720 NIPA1Q7RTP0 329 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 GPR149Q86SP6 731 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 ZBTB33Q86T24 672 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 NLRX1Q86UT6 975 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 PLA2G4DQ86XP0 818 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 POTEDQ86YR6 584 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 CCDC60Q8IWA6 550 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-225ENST00000641720 KIAA2013Q8IYS2 634 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 ETNPPLQ8TBG4 499 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 MICAL1Q8TDZ2 1067 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 FOXD4L4Q8WXT5 416 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-225ENST00000641720 AUTS2Q8WXX7 1259 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 SEMA4AQ9H3S1 761 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 KCNK12Q9HB15 430 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 AGO4Q9HCK5 861 aaKnown RBP8.31□□□□□ -1.08
PHGDH-225ENST00000641720 JPH1Q9HDC5 661 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-225ENST00000641720 ENTPD7Q9NQZ7 604 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 CYP26B1Q9NR63 512 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 DDX25Q9UHL0 483 aaKnown RBP8.31□□□□□ -1.08
PHGDH-225ENST00000641720 PCDHB7Q9Y5E2 793 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 COL1A2P08123 1366 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 DENND4CQ5VZ89 1909 aa8.31□□□□□ -1.08
PHGDH-225ENST00000641720 DDX39AO00148 427 aaKnown RBP8.3□□□□□ -1.08
PHGDH-225ENST00000641720 CCNT1O60563 726 aaKnown RBP8.3□□□□□ -1.08
PHGDH-225ENST00000641720 SRGAP2BP0DMP2 458 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 KLRC1P26715 233 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 MCM7P33993 719 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 PPM1AP35813 382 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 USP11P51784 963 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 SETQ01105 290 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-225ENST00000641720 NFX1Q12986 1120 aaKnown RBP8.3□□□□□ -1.08
PHGDH-225ENST00000641720 TDGQ13569 410 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 SMC1AQ14683 1233 aaKnown RBP8.3□□□□□ -1.08
PHGDH-225ENST00000641720 Q4G0T1 1027 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 FAM173BQ6P4H8 233 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 MOXD1Q6UVY6 613 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 ABHD15Q6UXT9 468 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 ECHDC2Q86YB7 292 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 LRRC43Q8N309 656 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 PLCD3Q8N3E9 789 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 FLCNQ8NFG4 579 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 BBXQ8WY36 941 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-225ENST00000641720 GLG1Q92896 1179 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 SLC5A5Q92911 643 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 CDHR1Q96JP9 859 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 ZNF558Q96NG5 402 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 OSMRQ99650 979 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 RTP3Q9BQQ7 232 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 TMEM60Q9H2L4 133 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 ADAMTS10Q9H324 1103 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 KCNMB3Q9NPA1 279 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 SLC9A2Q9UBY0 812 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 LRFN2Q9ULH4 789 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 ZDHHC9Q9Y397 364 aa8.3□□□□□ -1.08
PHGDH-225ENST00000641720 NUP205Q92621 2012 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 MEIS3P2A8K0S8 358 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 NT5C1B-RDH14C9J2C7 533 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 IPO5O00410 1097 aaKnown RBP8.29□□□□□ -1.08
PHGDH-225ENST00000641720 MAFGO15525 162 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 F13A1P00488 732 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 VTNP04004 478 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 SP9P0CG40 484 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 ZSCAN22P10073 491 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-225ENST00000641720 CTSAP10619 480 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 GCFC2P16383 781 aaKnown RBP8.29□□□□□ -1.08
PHGDH-225ENST00000641720 TRAPPC10P48553 1259 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 STAT5BP51692 787 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 CRYBB1P53674 252 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-225ENST00000641720 PTPN14Q15678 1187 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 ZNF174Q15697 407 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 KIZQ2M2Z5 673 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 TTC38Q5R3I4 469 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 PPP4R3AQ6IN85 833 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 CES5AQ6NT32 575 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 TMC7Q7Z402 723 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 BRAPQ7Z569 592 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 RNF168Q8IYW5 571 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-225ENST00000641720 SIX5Q8N196 739 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 RSAD2Q8WXG1 361 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 NELL1Q92832 810 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 HAS1Q92839 578 aa8.29□□□□□ -1.08
PHGDH-225ENST00000641720 CHAMP1Q96JM3 812 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms