RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 NR3C1P04150 777 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 CAPN2P17655 700 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 CDK11BP21127 795 aaKnown RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 RPL13P26373 211 aaKnown RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 LIG4P49917 911 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 MRE11P49959 708 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 MNX1P50219 401 aaPredicted RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 CDK7P50613 346 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 CRYBB1P53674 252 aaPredicted RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 ATN1P54259 1190 aaPredicted RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 MRPS6P82932 125 aaKnown RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 FKBP3Q00688 224 aaKnown RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 PLCB2Q00722 1185 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 MBTD1Q05BQ5 628 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 PTK7Q13308 1070 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 ADAM9Q13443 819 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 UVSSAQ2YD98 709 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 EDRF1Q3B7T1 1238 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 ZCWPW2Q504Y3 356 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 FOXR2Q6PJQ5 311 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 SRGAP1Q7Z6B7 1085 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 ZNF710Q8N1W2 664 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 ANKLE1Q8NAG6 615 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 NOC3LQ8WTT2 800 aaKnown RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 KCNN1Q92952 543 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 WNT8BQ93098 351 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 EEF2KMTQ96G04 330 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 OSMRQ99650 979 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 TARS2Q9BW92 718 aaKnown RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 MRPL4Q9BYD3 311 aaKnown RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 NFKBIZQ9BYH8 718 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 CELF4Q9BZC1 486 aaKnown RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 CCDC113Q9H0I3 377 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 FZD8Q9H461 694 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 THAP9Q9H5L6 903 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 CDHR5Q9HBB8 845 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 AGPAT3Q9NRZ7 376 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 SAMSN1Q9NSI8 373 aaKnown RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 MAGEC2Q9UBF1 373 aaPredicted RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 COLQQ9Y215 455 aaPredicted RBP9.61□□□□□ -0.87
HLA-B-258ENST00000640615 TRAF3IP3Q9Y228 551 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 USP20Q9Y2K6 914 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 ZMYM2Q9UBW7 1377 aa9.61□□□□□ -0.87
HLA-B-258ENST00000640615 TISP43B9A030 160 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 ANKRD63C9JTQ0 380 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 ACKR2O00590 384 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 HNRNPDLO14979 420 aaKnown RBP9.6□□□□□ -0.87
HLA-B-258ENST00000640615 CETN3O15182 167 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 PQBP1O60828 265 aaKnown RBP9.6□□□□□ -0.87
HLA-B-258ENST00000640615 RPLP2P05387 115 aaKnown RBP9.6□□□□□ -0.87
HLA-B-258ENST00000640615 CTSHP09668 335 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 NR2F2P24468 414 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 MATR3P43243 847 aaKnown RBP eCLIP9.6□□□□□ -0.87
HLA-B-258ENST00000640615 CYP2J2P51589 502 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 SNRPFP62306 86 aaKnown RBP9.6□□□□□ -0.87
HLA-B-258ENST00000640615 PRPF4BQ13523 1007 aaKnown RBP9.6□□□□□ -0.87
HLA-B-258ENST00000640615 ARMCX5Q6P1M9 558 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 SLC39A5Q6ZMH5 540 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 IFNLR1Q8IU57 520 aaPredicted RBP9.6□□□□□ -0.87
HLA-B-258ENST00000640615 FAM114A1Q8IWE2 563 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 DIS3LQ8TF46 1054 aaKnown RBP9.6□□□□□ -0.87
HLA-B-258ENST00000640615 CTAGE1Q96RT6 745 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 TCHPQ9BT92 498 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 PCIF1Q9H4Z3 704 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 C11orf49Q9H6J7 331 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 MINDY3Q9H8M7 445 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 PRMT7Q9NVM4 692 aaPredicted RBP9.6□□□□□ -0.87
HLA-B-258ENST00000640615 CGNQ9P2M7 1197 aaKnown RBP9.6□□□□□ -0.87
HLA-B-258ENST00000640615 TRPV2Q9Y5S1 764 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 CDY2AQ9Y6F7 541 aa9.6□□□□□ -0.87
HLA-B-258ENST00000640615 SCN10AQ9Y5Y9 1956 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 TTLL13PA6NNM8 815 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 KCNJ18B7U540 433 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 H0YGN5 161 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 TLR3O15455 904 aaKnown RBP9.59□□□□□ -0.87
HLA-B-258ENST00000640615 B4GALT5O43286 388 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 EXOC3O60645 756 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 ERLIN2O94905 339 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 PIGRP01833 764 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 CHRNA1P02708 482 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 EDN1P05305 212 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 IQCF3P0C7M6 154 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 COL6A1P12109 1028 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 ATP1A3P13637 1013 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 DARSP14868 501 aaKnown RBP9.59□□□□□ -0.87
HLA-B-258ENST00000640615 ZNF18P17022 549 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 FGFR4P22455 802 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 EIF4BP23588 611 aaKnown RBP9.59□□□□□ -0.87
HLA-B-258ENST00000640615 NCBP1Q09161 790 aaKnown RBP9.59□□□□□ -0.87
HLA-B-258ENST00000640615 KCNJ12Q14500 433 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 SNX17Q15036 470 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 NFIL3Q16649 462 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 FAM187BQ17R55 369 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 TRIM71Q2Q1W2 868 aaKnown RBP9.59□□□□□ -0.87
HLA-B-258ENST00000640615 CDKAL1Q5VV42 579 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 CEP135Q66GS9 1140 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 SLFN12LQ6IEE8 588 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 SLC39A4Q6P5W5 647 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 ZPBP2Q6X784 338 aa9.59□□□□□ -0.87
HLA-B-258ENST00000640615 LRRC55Q6ZSA7 311 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms