RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 GIT2Q14161 759 aa29.48■■■□□ 2.31
VEGFA-231ENST00000640499 RRAGBQ5VZM2 374 aa29.48■■■□□ 2.31
VEGFA-231ENST00000640499 LRRC55Q6ZSA7 311 aa29.48■■■□□ 2.31
VEGFA-231ENST00000640499 TAS1R3Q7RTX0 852 aa29.48■■■□□ 2.31
VEGFA-231ENST00000640499 MRPL10Q7Z7H8 261 aaKnown RBP29.48■■■□□ 2.31
VEGFA-231ENST00000640499 CDR2LQ86X02 465 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-231ENST00000640499 ZBTB8OSQ8IWT0 167 aa29.48■■■□□ 2.31
VEGFA-231ENST00000640499 DRC1Q96MC2 740 aa29.48■■■□□ 2.31
VEGFA-231ENST00000640499 REEP2Q9BRK0 252 aa29.48■■■□□ 2.31
VEGFA-231ENST00000640499 NTPCRQ9BSD7 190 aaKnown RBP29.48■■■□□ 2.31
VEGFA-231ENST00000640499 C2orf40Q9H1Z8 148 aa29.48■■■□□ 2.31
VEGFA-231ENST00000640499 STK17AQ9UEE5 414 aa29.48■■■□□ 2.31
VEGFA-231ENST00000640499 COL6A3P12111 3177 aa29.48■■■□□ 2.31
VEGFA-231ENST00000640499 MYH11P35749 1972 aa29.47■■■□□ 2.31
VEGFA-231ENST00000640499 A0A1B0GUA9 196 aa29.47■■■□□ 2.31
VEGFA-231ENST00000640499 TBKBP1A7MCY6 615 aa29.47■■■□□ 2.31
VEGFA-231ENST00000640499 LONRF3Q496Y0 759 aa29.47■■■□□ 2.31
VEGFA-231ENST00000640499 EPC2Q52LR7 807 aa29.47■■■□□ 2.31
VEGFA-231ENST00000640499 RNF169Q8NCN4 708 aa29.47■■■□□ 2.31
VEGFA-231ENST00000640499 SMG8Q8ND04 991 aaKnown RBP29.47■■■□□ 2.31
VEGFA-231ENST00000640499 LEO1Q8WVC0 666 aaPredicted RBP29.47■■■□□ 2.31
VEGFA-231ENST00000640499 PRMT7Q9NVM4 692 aaPredicted RBP29.47■■■□□ 2.31
VEGFA-231ENST00000640499 ARHGAP28Q9P2N2 729 aa29.47■■■□□ 2.31
VEGFA-231ENST00000640499 STXBP5LQ9Y2K9 1186 aa29.47■■■□□ 2.31
VEGFA-231ENST00000640499 CCDC169A6NNP5 214 aa29.46■■■□□ 2.31
VEGFA-231ENST00000640499 PLS3P13797 630 aa29.46■■■□□ 2.31
VEGFA-231ENST00000640499 E2F4Q16254 413 aa29.46■■■□□ 2.31
VEGFA-231ENST00000640499 TMEM192Q8IY95 271 aa29.46■■■□□ 2.31
VEGFA-231ENST00000640499 PDILTQ8N807 584 aa29.46■■■□□ 2.31
VEGFA-231ENST00000640499 C17orf75Q9HAS0 396 aa29.46■■■□□ 2.31
VEGFA-231ENST00000640499 RNF216Q9NWF9 866 aaPredicted RBP29.46■■■□□ 2.31
VEGFA-231ENST00000640499 COL4A4P53420 1690 aaPredicted RBP29.46■■■□□ 2.31
VEGFA-231ENST00000640499 RALGAPA2Q2PPJ7 1873 aa29.46■■■□□ 2.31
VEGFA-231ENST00000640499 CNTNAP2Q9UHC6 1331 aa29.45■■■□□ 2.31
VEGFA-231ENST00000640499 ACKR2O00590 384 aa29.45■■■□□ 2.31
VEGFA-231ENST00000640499 PRKCBP05771 671 aa29.45■■■□□ 2.31
VEGFA-231ENST00000640499 TXLNAP40222 546 aa29.45■■■□□ 2.31
VEGFA-231ENST00000640499 ME1P48163 572 aa29.45■■■□□ 2.31
VEGFA-231ENST00000640499 NT5DC1Q5TFE4 455 aa29.45■■■□□ 2.31
VEGFA-231ENST00000640499 NOTUMQ6P988 496 aa29.45■■■□□ 2.31
VEGFA-231ENST00000640499 AGMOQ6ZNB7 445 aa29.45■■■□□ 2.31
VEGFA-231ENST00000640499 CCDC73Q6ZRK6 1079 aa29.45■■■□□ 2.31
VEGFA-231ENST00000640499 PRIMPOLQ96LW4 560 aa29.45■■■□□ 2.31
VEGFA-231ENST00000640499 TMEM117Q9H0C3 514 aa29.45■■■□□ 2.31
VEGFA-231ENST00000640499 CWH43Q9H720 699 aa29.45■■■□□ 2.31
VEGFA-231ENST00000640499 EYSQ5T1H1 3165 aa29.45■■■□□ 2.3
VEGFA-231ENST00000640499 MYMKA6NI61 221 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 SLC16A4O15374 487 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 BMPR1AP36894 532 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 ZNF131P52739 623 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 DMP1Q13316 513 aaPredicted RBP29.44■■■□□ 2.3
VEGFA-231ENST00000640499 MAPK6Q16659 721 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 TMEM161BQ8NDZ6 487 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 HELQQ8TDG4 1101 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 GDPD5Q8WTR4 605 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 SPIRE2Q8WWL2 714 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 CCDC51Q96ER9 411 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 RNF39Q9H2S5 420 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 TMEM134Q9H6X4 195 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 KMT5AQ9NQR1 393 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 TYW1Q9NV66 732 aaKnown RBP29.44■■■□□ 2.3
VEGFA-231ENST00000640499 ODF2LQ9ULJ1 636 aa29.44■■■□□ 2.3
VEGFA-231ENST00000640499 SKIP12755 728 aa29.43■■■□□ 2.3
VEGFA-231ENST00000640499 LIG1P18858 919 aa29.43■■■□□ 2.3
VEGFA-231ENST00000640499 NCLP19338 710 aaKnown RBP29.43■■■□□ 2.3
VEGFA-231ENST00000640499 STAT6P42226 847 aa29.43■■■□□ 2.3
VEGFA-231ENST00000640499 RAB27AP51159 221 aa29.43■■■□□ 2.3
VEGFA-231ENST00000640499 AFF1P51825 1210 aaKnown RBP29.43■■■□□ 2.3
VEGFA-231ENST00000640499 EFNA5P52803 228 aa29.43■■■□□ 2.3
VEGFA-231ENST00000640499 KRT85P78386 507 aa29.43■■■□□ 2.3
VEGFA-231ENST00000640499 RESP18Q5W5W9 173 aa29.43■■■□□ 2.3
VEGFA-231ENST00000640499 EEF1DP3Q658K8 133 aa29.43■■■□□ 2.3
VEGFA-231ENST00000640499 FIZ1Q96SL8 496 aa29.43■■■□□ 2.3
VEGFA-231ENST00000640499 PDZD7Q9H5P4 517 aa29.43■■■□□ 2.3
VEGFA-231ENST00000640499 HES2Q9Y543 173 aa29.43■■■□□ 2.3
VEGFA-231ENST00000640499 IPPQ9Y573 584 aa29.43■■■□□ 2.3
VEGFA-231ENST00000640499 C5orf67F2Z3F1 127 aa29.42■■■□□ 2.3
VEGFA-231ENST00000640499 K7ERI5 159 aa29.42■■■□□ 2.3
VEGFA-231ENST00000640499 OFD1O75665 1012 aa29.42■■■□□ 2.3
VEGFA-231ENST00000640499 FOSL2P15408 326 aa29.42■■■□□ 2.3
VEGFA-231ENST00000640499 NUCB2P80303 420 aa29.42■■■□□ 2.3
VEGFA-231ENST00000640499 PRPF4BQ13523 1007 aaKnown RBP29.42■■■□□ 2.3
VEGFA-231ENST00000640499 FBXO22Q8NEZ5 403 aa29.42■■■□□ 2.3
VEGFA-231ENST00000640499 DNAJC19Q96DA6 116 aa29.42■■■□□ 2.3
VEGFA-231ENST00000640499 HOXA2O43364 376 aa29.41■■■□□ 2.3
VEGFA-231ENST00000640499 POU3F3P20264 500 aaPredicted RBP29.41■■■□□ 2.3
VEGFA-231ENST00000640499 NCBP1Q09161 790 aaKnown RBP29.41■■■□□ 2.3
VEGFA-231ENST00000640499 SPATA32Q96LK8 384 aa29.41■■■□□ 2.3
VEGFA-231ENST00000640499 SAMD11Q96NU1 681 aa29.41■■■□□ 2.3
VEGFA-231ENST00000640499 REV3LO60673 3130 aa29.41■■■□□ 2.3
VEGFA-231ENST00000640499 MAPTP10636 758 aaKnown RBP29.4■■■□□ 2.3
VEGFA-231ENST00000640499 NCKAP1LP55160 1127 aa29.4■■■□□ 2.3
VEGFA-231ENST00000640499 SLC27A1Q6PCB7 646 aa29.4■■■□□ 2.3
VEGFA-231ENST00000640499 SV2BQ7L1I2 683 aa29.4■■■□□ 2.3
VEGFA-231ENST00000640499 DYMQ7RTS9 669 aa29.4■■■□□ 2.3
VEGFA-231ENST00000640499 DDX12PQ92771 950 aa29.4■■■□□ 2.3
VEGFA-231ENST00000640499 NXF3Q9H4D5 531 aaKnown RBP29.4■■■□□ 2.3
VEGFA-231ENST00000640499 RBM19Q9Y4C8 960 aaKnown RBP29.4■■■□□ 2.3
VEGFA-231ENST00000640499 ATP6V1DQ9Y5K8 247 aa29.4■■■□□ 2.3
VEGFA-231ENST00000640499 MTCH2Q9Y6C9 303 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms