RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 CCDC195A0A1B0GUA6 201 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 FCER1AP12319 257 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 SCG3Q8WXD2 468 aaKnown RBP15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 SCOCQ9UIL1 159 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 APOBEC2Q9Y235 224 aaKnown RBP15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 ARHGDIAP52565 204 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 COPS2P61201 443 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 PDCLQ13371 301 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 PGBD3Q8N328 593 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 ACAD9Q9H845 621 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 FGFR1OP2Q9NVK5 253 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 RBAKQ9NYW8 714 aaPredicted RBP15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 CTIFO43310 598 aaKnown RBP15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 RCAN1P53805 252 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 GPS1Q13098 491 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 CALR3Q96L12 384 aaKnown RBP15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 OSBPL9Q96SU4 736 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 NEMP1O14524 444 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 SKIP12755 728 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 PMS2P54278 862 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 ALX1Q15699 326 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 SMAD1Q15797 465 aaKnown RBP15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 TMEM259Q4ZIN3 620 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 RBM46Q8TBY0 533 aaKnown RBP15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 SLC7A5P2Q9GIP4 190 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 POU5F1BQ06416 359 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 ORC2Q13416 577 aaPredicted RBP15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 STAP1Q9ULZ2 295 aa15.66■□□□□ 0.1
HNRNPU-226ENST00000640218 NAALADL2Q58DX5 795 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 HEATR6Q6AI08 1181 aaKnown RBP15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 PPM1NQ8N819 430 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 RPAP3Q9H6T3 665 aaPredicted RBP15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 MLXIPLQ9NP71 852 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 PLEKHG2Q9H7P9 1386 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 TADA3O75528 432 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 UPP2O95045 317 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 TRIM49P0CI25 452 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 TRIM49CP0CI26 452 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 SMARCA1P28370 1054 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 NOP14P78316 857 aaKnown RBP15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 FOXO4P98177 505 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 CAV1Q03135 178 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 IMPG1Q17R60 797 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 GCOM2Q9BZD3 368 aaPredicted RBP15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 KPNA7A9QM74 516 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 TEX33O43247 280 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 MOCS2O96007 188 aaPredicted RBP15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 HADHAP40939 763 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 CAPRIN1Q14444 709 aaKnown RBP15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 KLHL38Q2WGJ6 581 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 GPD1LQ8N335 351 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 SMYD3Q9H7B4 428 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 ARHGAP31Q2M1Z3 1444 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 EMSYQ7Z589 1322 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 H3BRJ5 948 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 AKR1B1P15121 316 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 MXD4Q14582 209 aaPredicted RBP15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 ACAD11Q709F0 780 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 TRIM59Q8IWR1 403 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 FAM84BQ96KN1 310 aaPredicted RBP15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 TSR3Q9UJK0 312 aaKnown RBP15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 A8MXQ7 604 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 GYG2O15488 501 aa15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 FAM102AQ5T9C2 384 aaPredicted RBP15.65■□□□□ 0.1
HNRNPU-226ENST00000640218 TMEM247A6NEH6 219 aa15.64■□□□□ 0.1
HNRNPU-226ENST00000640218 MAGOHP61326 146 aaKnown RBP15.64■□□□□ 0.1
HNRNPU-226ENST00000640218 TTC8Q8TAM2 541 aa15.64■□□□□ 0.1
HNRNPU-226ENST00000640218 KIF12Q96FN5 646 aa15.64■□□□□ 0.1
HNRNPU-226ENST00000640218 ISCA1Q9BUE6 129 aa15.64■□□□□ 0.1
HNRNPU-226ENST00000640218 SLC9A2Q9UBY0 812 aa15.64■□□□□ 0.1
HNRNPU-226ENST00000640218 L3MBTL1Q9Y468 752 aa15.64■□□□□ 0.1
HNRNPU-226ENST00000640218 GGCXP38435 758 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 AGO2Q9UKV8 859 aaKnown RBP15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 A0A0G2JLW4 131 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 ANP32DO95626 131 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 KRT7P08729 469 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 DMTNQ08495 405 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 RASSF3Q86WH2 238 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 MAGEB5Q9BZ81 275 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 DHX35Q9H5Z1 703 aaKnown RBP15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 SP110Q9HB58 689 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 TTC26A0AVF1 554 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 E5RI56 91 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 MDM2Q00987 491 aaPredicted RBP15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 ROR1Q01973 937 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 BEND6Q5SZJ8 279 aaPredicted RBP15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 SIK2Q9H0K1 926 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 HDAC6Q9UBN7 1215 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 PREX2Q70Z35 1606 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 NPHP3-ACAD11A0A0J9YXS1 232 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 KIF28PB7ZC32 967 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 FOXN1O15353 648 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 USP11P51784 963 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 FSCBQ5H9T9 825 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 CCNYL1Q8N7R7 359 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 ACAP3Q96P50 834 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 DDX47Q9H0S4 455 aaKnown RBP15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 ACCSLQ4AC99 568 aa15.64■□□□□ 0.09
HNRNPU-226ENST00000640218 SCARF1Q14162 830 aa15.63■□□□□ 0.09
HNRNPU-226ENST00000640218 EFHC2Q5JST6 749 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms