RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 MRPL11Q9Y3B7 192 aaKnown RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 PCDHA8Q9Y5H6 950 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 PALM3A6NDB9 673 aaPredicted RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CCDC169A6NNP5 214 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CHMP2AO43633 222 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CIB2O75838 187 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CFBP00751 764 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 SERPINB2P05120 415 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 POTEIP0CG38 1075 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 ADRA2BP18089 450 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CALB2P22676 271 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 VHLP40337 213 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CCNFP41002 786 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 TSPY1Q01534 308 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 KPNB1Q14974 876 aaKnown RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 LRRC41Q15345 812 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 QPCTQ16769 361 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 USH1GQ495M9 461 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 LACTB2Q53H82 288 aaPredicted RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 ANO7Q6IWH7 933 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 TPH2Q8IWU9 490 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 SCUBE1Q8IWY4 988 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 FAM178BQ8IXR5 827 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 NLGN1Q8N2Q7 840 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CCT7Q99832 543 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 PARVBQ9HBI1 364 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CD209Q9NNX6 404 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CNGB3Q9NQW8 809 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 DDX18Q9NVP1 670 aaKnown RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 ZBTB21Q9ULJ3 1066 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 MOCS3O95396 460 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 KRT75O95678 551 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 GYPCP04921 128 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 POLR2MP0CAP2 368 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 PSMC2P35998 433 aaKnown RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 BPIFB4P59827 614 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 R3HDM1Q15032 1099 aaKnown RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 WDR44Q5JSH3 913 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 DENND2CQ68D51 928 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 LRP10Q7Z4F1 713 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 DAGLBQ8NCG7 672 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 HDAC7Q8WUI4 952 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 RAD54LQ92698 747 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 LENG1Q96BZ8 264 aaPredicted RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 EURLQ9NYK6 297 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 PHF24Q9UPV7 400 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 H0YIN7 160 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 PGRMC1O00264 195 aaKnown RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 PSMD14O00487 310 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 RGL2O15211 777 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 FAM163BP0C2L3 166 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 KCNA2P16389 499 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 HSPA6P17066 643 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 GRIN1Q05586 938 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 TCP10Q12799 353 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 PLS1Q14651 629 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 CDKAL1Q5VV42 579 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 TBC1D9BQ66K14 1250 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 FAM196AQ6ZSG2 479 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 CCDC25Q86WR0 208 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 CCNJLQ8IV13 435 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 RBBP8NLQ8NC74 664 aaPredicted RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 CFAP61Q8NHU2 1237 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 DDX50Q9BQ39 737 aaKnown RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 WDR11Q9BZH6 1224 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 THEGQ9P2T0 379 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 SRP68Q9UHB9 627 aaKnown RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 SUGT1Q9Y2Z0 365 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 USP15Q9Y4E8 981 aaPredicted RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 COMMD3-BMI1R4GMX3 469 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 NALCNQ8IZF0 1738 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 TCHHQ07283 1943 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 NRAPQ86VF7 1730 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 SFI1A8K8P3 1242 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 CCDC188H7C350 402 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 ZBTB5O15062 677 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 KDM1AO60341 852 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 PYGMP11217 842 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 S100A1P23297 94 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 GALK1P51570 392 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 PMS2P54278 862 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 TBX2Q13207 712 aaPredicted RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 ABCB5Q2M3G0 1257 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 LIN9Q5TKA1 542 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 ARHGAP27Q6ZUM4 889 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 TRMT1LQ7Z2T5 733 aaKnown RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 FOXP4Q8IVH2 680 aaPredicted RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 LRRC34Q8IZ02 419 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 VGLL2Q8N8G2 317 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 CCT6BQ92526 530 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 RUNDC3BQ96NL0 473 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 CYTH2Q99418 400 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 RIOK1Q9BRS2 568 aaKnown RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 DPH5Q9H2P9 285 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 FAM217BQ9NTX9 383 aaPredicted RBP6.06□□□□□ -1.44
SCARB2-218ENST00000639715 PI4KBQ9UBF8 816 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 SCINQ9Y6U3 715 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 A0A1W2PQJ5 194 aa6.06□□□□□ -1.44
SCARB2-218ENST00000639715 ESYT2A0FGR8 921 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms