RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 PRIMA1Q86XR5 153 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 OR52N2Q8NGI0 321 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 GPR150Q8NGU9 434 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 RTF1Q92541 710 aaKnown RBP5.25□□□□□ -1.57
CCDC7-211ENST00000638889 CPPED1Q9BRF8 314 aaPredicted RBP5.25□□□□□ -1.57
CCDC7-211ENST00000638889 SLC46A2Q9BY10 475 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 ZMAT4Q9H898 229 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 INTS7Q9NVH2 962 aaKnown RBP5.25□□□□□ -1.57
CCDC7-211ENST00000638889 ING3Q9NXR8 418 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 MAGEC2Q9UBF1 373 aaPredicted RBP5.25□□□□□ -1.57
CCDC7-211ENST00000638889 CDK11AQ9UQ88 783 aaPredicted RBP5.25□□□□□ -1.57
CCDC7-211ENST00000638889 DNAJC6O75061 913 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 NUDT3O95989 172 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 ATP2A2P16615 1042 aaKnown RBP5.24□□□□□ -1.57
CCDC7-211ENST00000638889 SDSP20132 328 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 VPS72Q15906 364 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 CCDC178Q5BJE1 867 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 CXorf67Q86X51 503 aaPredicted RBP5.24□□□□□ -1.57
CCDC7-211ENST00000638889 PASD1Q8IV76 773 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 SYNPOQ8N3V7 929 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 EFHBQ8N7U6 833 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 CDYL2Q8N8U2 506 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 MYEOVQ96EZ4 313 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 KCNH6Q9H252 994 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 IFT57Q9NWB7 429 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 EIF2B4Q9UI10 523 aaKnown RBP5.24□□□□□ -1.57
CCDC7-211ENST00000638889 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.24□□□□□ -1.57
CCDC7-211ENST00000638889 CLCA2Q9UQC9 943 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 PCDHB6Q9Y5E3 794 aa5.24□□□□□ -1.57
CCDC7-211ENST00000638889 F2P00734 622 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 GPR15P49685 360 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 MRPL49Q13405 166 aaKnown RBP5.23□□□□□ -1.57
CCDC7-211ENST00000638889 CCDC142Q17RM4 750 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 FAM214AQ32MH5 1076 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 ESPNLQ6ZVH7 1005 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 TAS1R1Q7RTX1 841 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 PIK3C3Q8NEB9 887 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 OR5M3Q8NGP4 307 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 IL17RAQ96F46 866 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 DCLRE1CQ96SD1 692 aaKnown RBP5.23□□□□□ -1.57
CCDC7-211ENST00000638889 NDC1Q9BTX1 674 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 EPC1Q9H2F5 836 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 ZNHIT2Q9UHR6 403 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 HDAC5Q9UQL6 1122 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 TNFRSF18Q9Y5U5 241 aa5.23□□□□□ -1.57
CCDC7-211ENST00000638889 ST20-MTHFSA0A0A6YYL1 179 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 ZAR1LA6NP61 321 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 AHRRA9YTQ3 701 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 ELL2O00472 640 aaPredicted RBP5.22□□□□□ -1.57
CCDC7-211ENST00000638889 NRP2O60462 931 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 GAS7O60861 476 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 SEC24DO94855 1032 aaPredicted RBP5.22□□□□□ -1.57
CCDC7-211ENST00000638889 PCDH8O95206 1070 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 LY86O95711 162 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 ZFP36P26651 326 aaKnown RBP5.22□□□□□ -1.57
CCDC7-211ENST00000638889 CASRP41180 1078 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 CD69Q07108 199 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 PABPC4Q13310 644 aaKnown RBP eCLIP5.22□□□□□ -1.57
CCDC7-211ENST00000638889 GPR158Q5T848 1215 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 HECTD2Q5U5R9 776 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 RIOX1Q9H6W3 641 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 CYP4F11Q9HBI6 524 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 TMEM260Q9NX78 707 aa5.22□□□□□ -1.57
CCDC7-211ENST00000638889 CENPVL1A0A0U1RR11 272 aa5.21□□□□□ -1.58
CCDC7-211ENST00000638889 GAGE12BA1L429 117 aa5.21□□□□□ -1.58
CCDC7-211ENST00000638889 GAGE12HA6NDE8 117 aa5.21□□□□□ -1.58
CCDC7-211ENST00000638889 TMEM200CA6NKL6 621 aa5.21□□□□□ -1.58
CCDC7-211ENST00000638889 PPP1R12AO14974 1030 aaPredicted RBP5.21□□□□□ -1.58
CCDC7-211ENST00000638889 PFKMP08237 780 aa5.21□□□□□ -1.58
CCDC7-211ENST00000638889 POU3F2P20265 443 aaPredicted RBP5.21□□□□□ -1.58
CCDC7-211ENST00000638889 XPAP23025 273 aaPredicted RBP5.21□□□□□ -1.58
CCDC7-211ENST00000638889 GZMKP49863 264 aa5.21□□□□□ -1.58
CCDC7-211ENST00000638889 SH3TC2Q8TF17 1288 aa5.21□□□□□ -1.58
CCDC7-211ENST00000638889 MRFAP1L1Q96HT8 127 aa5.21□□□□□ -1.58
CCDC7-211ENST00000638889 LSM14BQ9BX40 385 aaKnown RBP5.21□□□□□ -1.58
CCDC7-211ENST00000638889 CPEB1Q9BZB8 566 aaKnown RBP5.21□□□□□ -1.58
CCDC7-211ENST00000638889 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.21□□□□□ -1.58
CCDC7-211ENST00000638889 DIRC3C9JPN6 131 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 RNASET2O00584 256 aaKnown RBP5.2□□□□□ -1.58
CCDC7-211ENST00000638889 ASMTLO95671 621 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 CFBP00751 764 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 NRG3P56975 720 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 DSG1Q02413 1049 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 DUSP2Q05923 314 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 GPRIN1Q7Z2K8 1008 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 GDF7Q7Z4P5 450 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 ARHGEF19Q8IW93 802 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 LILRA3Q8N6C8 439 aaPredicted RBP5.2□□□□□ -1.58
CCDC7-211ENST00000638889 GAB3Q8WWW8 586 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 RSAD2Q8WXG1 361 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 FERMT2Q96AC1 680 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 ZNF764Q96H86 408 aaPredicted RBP5.2□□□□□ -1.58
CCDC7-211ENST00000638889 ZNF496Q96IT1 587 aaPredicted RBP5.2□□□□□ -1.58
CCDC7-211ENST00000638889 ZNF768Q9H5H4 540 aaKnown RBP5.2□□□□□ -1.58
CCDC7-211ENST00000638889 H2AFY2Q9P0M6 372 aaPredicted RBP5.2□□□□□ -1.58
CCDC7-211ENST00000638889 PTGFRNQ9P2B2 879 aa5.2□□□□□ -1.58
CCDC7-211ENST00000638889 A0A1W2PR48 441 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 PRR5-ARHGAP8B1AHC4 643 aa5.19□□□□□ -1.58
CCDC7-211ENST00000638889 HSP90B1P14625 803 aaKnown RBP5.19□□□□□ -1.58
CCDC7-211ENST00000638889 APOBEC3AP31941 199 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms