RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 UBL4BQ8N7F7 174 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 HOOK2Q96ED9 719 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 DMAC2Q9NW81 257 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 PCYOX1Q9UHG3 505 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 CNOT7Q9UIV1 285 aaKnown RBP11.77□□□□□ -0.53
SNIP1-204ENST00000638725 GGT7Q9UJ14 662 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 CD2APQ9Y5K6 639 aa11.77□□□□□ -0.53
SNIP1-204ENST00000638725 MIF4GDA9UHW6 222 aaKnown RBP11.76□□□□□ -0.53
SNIP1-204ENST00000638725 RASGRF2O14827 1237 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 ATMINO43313 823 aaPredicted RBP11.76□□□□□ -0.53
SNIP1-204ENST00000638725 SLITRK3O94933 977 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 COMTP21964 271 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 CTNNA2P26232 953 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 SLC8A1P32418 973 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 KCNJ1P48048 391 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 TCP10Q12799 353 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
SNIP1-204ENST00000638725 SLC15A2Q16348 729 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 C11orf63Q6NUN7 778 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 ZNF720Q7Z2F6 126 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 TRPM8Q7Z2W7 1104 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 CCDC25Q86WR0 208 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 FAM178BQ8IXR5 827 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 LMO3Q8TAP4 145 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 CCDC17Q96LX7 622 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 HSD17B14Q9BPX1 270 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 AGAP1Q9UPQ3 857 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 STK24Q9Y6E0 443 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 PODXLO00592 558 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 FOSP01100 380 aaPredicted RBP11.76□□□□□ -0.53
SNIP1-204ENST00000638725 GSTA1P08263 222 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 CLTAP09496 248 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 ALAS1P13196 640 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 BFSP1Q12934 665 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 LRRC14Q15048 493 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 CLUL1Q15846 466 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 CNGA2Q16280 664 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 SEL1L2Q5TEA6 688 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 PNMA8AQ86V59 439 aaPredicted RBP11.76□□□□□ -0.53
SNIP1-204ENST00000638725 SIAH1Q8IUQ4 282 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 ARHGEF19Q8IW93 802 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 CCDC105Q8IYK2 499 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 CCDC134Q9H6E4 229 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 VEZTQ9HBM0 779 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 UBE2TQ9NPD8 197 aaPredicted RBP11.76□□□□□ -0.53
SNIP1-204ENST00000638725 AFF2P51816 1311 aa11.76□□□□□ -0.53
SNIP1-204ENST00000638725 EXOC3O60645 756 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 BBOX1O75936 387 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 PYGMP11217 842 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 HSPA6P17066 643 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 PEX5P50542 639 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 HADHBP55084 474 aaKnown RBP11.75□□□□□ -0.53
SNIP1-204ENST00000638725 DLG4P78352 724 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 PPP2R5AQ15172 486 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 LLGL1Q15334 1064 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 NBPF9Q3BBW0 867 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 ACCSLQ4AC99 568 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 APOBEC3HQ6NTF7 200 aaKnown RBP11.75□□□□□ -0.53
SNIP1-204ENST00000638725 RPUSD2Q8IZ73 545 aaKnown RBP11.75□□□□□ -0.53
SNIP1-204ENST00000638725 MGARPQ8TDB4 240 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 MKL1Q969V6 931 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 BTBD6Q96KE9 485 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 WDR18Q9BV38 432 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 NYAP2Q9P242 653 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 PARP2Q9UGN5 583 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 SUFUQ9UMX1 484 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 IGLV3-22A0A075B6J6 115 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 F5H6K3 240 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 UBOX5O94941 541 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 SERPINB2P05120 415 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 RARGP13631 454 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 SCP2P22307 547 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 ICA1Q05084 483 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 LONRF1Q17RB8 773 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 CERKLQ49MI3 558 aaPredicted RBP11.75□□□□□ -0.53
SNIP1-204ENST00000638725 TNFAIP8L3Q5GJ75 292 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 ODR4Q5SWX8 454 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 BTNL9Q6UXG8 535 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 OTUD6AQ7L8S5 288 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 OTOP1Q7RTM1 612 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 EXOC3L1Q86VI1 746 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 POP1Q99575 1024 aaKnown RBP11.75□□□□□ -0.53
SNIP1-204ENST00000638725 TMEM109Q9BVC6 243 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■■■■ 71.4
SNIP1-204ENST00000638725 DONSONQ9NYP3 566 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 WRAP73Q9P2S5 460 aaPredicted RBP11.75□□□□□ -0.53
SNIP1-204ENST00000638725 PCDHAC2Q9Y5I4 1007 aa11.75□□□□□ -0.53
SNIP1-204ENST00000638725 DDTLA6NHG4 134 aaPredicted RBP11.74□□□□□ -0.53
SNIP1-204ENST00000638725 SNX3O60493 162 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 RPSAP08865 295 aaKnown RBP11.74□□□□□ -0.53
SNIP1-204ENST00000638725 CREB1P16220 341 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 COILP38432 576 aaPredicted RBP11.74□□□□□ -0.53
SNIP1-204ENST00000638725 MMP14P50281 582 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 GPC5P78333 572 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 DOK7Q18PE1 504 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 LRCH2Q5VUJ6 765 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 KAT5Q92993 513 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 PCDHB18PQ96TA0 734 aa11.74□□□□□ -0.53
SNIP1-204ENST00000638725 DDX23Q9BUQ8 820 aaKnown RBP11.74□□□□□ -0.53
SNIP1-204ENST00000638725 NSRP1Q9H0G5 558 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms