RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 NRDE2Q9H7Z3 1164 aa18.25■□□□□ 0.51
COLCA2-206ENST00000638573 ENTPD7Q9NQZ7 604 aa18.25■□□□□ 0.51
COLCA2-206ENST00000638573 CHST12Q9NRB3 414 aa18.25■□□□□ 0.51
COLCA2-206ENST00000638573 TBC1D13Q9NVG8 400 aa18.25■□□□□ 0.51
COLCA2-206ENST00000638573 USP20Q9Y2K6 914 aa18.25■□□□□ 0.51
COLCA2-206ENST00000638573 HES2Q9Y543 173 aa18.25■□□□□ 0.51
COLCA2-206ENST00000638573 PCDHB2Q9Y5E7 798 aa18.25■□□□□ 0.51
COLCA2-206ENST00000638573 NCOR1O75376 2440 aa18.24■□□□□ 0.51
COLCA2-206ENST00000638573 HOXA2O43364 376 aa18.24■□□□□ 0.51
COLCA2-206ENST00000638573 TSPAN1O60635 241 aa18.24■□□□□ 0.51
COLCA2-206ENST00000638573 EOMESO95936 686 aa18.24■□□□□ 0.51
COLCA2-206ENST00000638573 GLRA2P23416 452 aa18.24■□□□□ 0.51
COLCA2-206ENST00000638573 ANP32AP39687 249 aaKnown RBP18.24■□□□□ 0.51
COLCA2-206ENST00000638573 DUSP6Q16828 381 aa18.24■□□□□ 0.51
COLCA2-206ENST00000638573 SMG8Q8ND04 991 aaKnown RBP18.24■□□□□ 0.51
COLCA2-206ENST00000638573 VN1R3Q9BXE9 311 aa18.24■□□□□ 0.51
COLCA2-206ENST00000638573 POLR3FQ9H1D9 316 aaPredicted RBP18.24■□□□□ 0.51
COLCA2-206ENST00000638573 SPG21Q9NZD8 308 aa18.24■□□□□ 0.51
COLCA2-206ENST00000638573 DAXXQ9UER7 740 aaPredicted RBP18.24■□□□□ 0.51
COLCA2-206ENST00000638573 ARID2Q68CP9 1835 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 TTLL13PA6NNM8 815 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 DDHD2O94830 711 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 ARL2P36404 184 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 PRPHP41219 470 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 SLC11A1P49279 550 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 PLCB3Q01970 1234 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 UBE3AQ05086 875 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 MBTD1Q05BQ5 628 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 SMAD4Q13485 552 aaKnown RBP18.23■□□□□ 0.51
COLCA2-206ENST00000638573 SMAD2Q15796 467 aaKnown RBP18.23■□□□□ 0.51
COLCA2-206ENST00000638573 AMHR2Q16671 573 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 NOMO2Q5JPE7 1267 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 DTHD1Q6ZMT9 781 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 SRGAP1Q7Z6B7 1085 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 C4orf32Q8N8J7 132 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 BSNDQ8WZ55 320 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 TRAIPQ9BWF2 469 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 INO80BQ9C086 356 aaPredicted RBP18.23■□□□□ 0.51
COLCA2-206ENST00000638573 ANKEF1Q9NU02 776 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
COLCA2-206ENST00000638573 STK24Q9Y6E0 443 aa18.23■□□□□ 0.51
COLCA2-206ENST00000638573 MYH15Q9Y2K3 1946 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 PP2D1A8MPX8 630 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 F8W810 466 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 INO80B-WBP1J3KQ70 363 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 POMCP01189 267 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 ZSCAN22P10073 491 aaPredicted RBP18.22■□□□□ 0.51
COLCA2-206ENST00000638573 FXR2P51116 673 aaKnown RBP eCLIP18.22■□□□□ 0.51
COLCA2-206ENST00000638573 PTENP60484 403 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 ATP2C1P98194 919 aaPredicted RBP18.22■□□□□ 0.51
COLCA2-206ENST00000638573 CDC42EP1Q00587 391 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 FOXD4L5Q5VV16 416 aaPredicted RBP18.22■□□□□ 0.51
COLCA2-206ENST00000638573 HAUS3Q68CZ6 603 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 KANK3Q6NY19 840 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 TMC7Q7Z402 723 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 SMRP1Q8NCR6 262 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 TCP11Q8WWU5 503 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 FOXD4L4Q8WXT5 416 aaPredicted RBP18.22■□□□□ 0.51
COLCA2-206ENST00000638573 LRFN3Q9BTN0 628 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 APOL6Q9BWW8 343 aa18.22■□□□□ 0.51
COLCA2-206ENST00000638573 USP15Q9Y4E8 981 aaPredicted RBP18.22■□□□□ 0.51
COLCA2-206ENST00000638573 C19orf67A6NJJ6 358 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 NCK2O43639 380 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 ZNF623O75123 536 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 EDN1P05305 212 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 GALTP07902 379 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 CA8P35219 290 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 KCNC3Q14003 757 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 SF3A1Q15459 793 aaKnown RBP18.21■□□□□ 0.51
COLCA2-206ENST00000638573 IL17AQ16552 155 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 PUS10Q3MIT2 529 aaKnown RBP18.21■□□□□ 0.51
COLCA2-206ENST00000638573 ARL6IP4Q66PJ3 421 aaKnown RBP18.21■□□□□ 0.51
COLCA2-206ENST00000638573 GLB1LQ6UWU2 654 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 MRPL10Q7Z7H8 261 aaKnown RBP18.21■□□□□ 0.51
COLCA2-206ENST00000638573 ADHFE1Q8IWW8 467 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 NXF3Q9H4D5 531 aaKnown RBP18.21■□□□□ 0.51
COLCA2-206ENST00000638573 MIOSQ9NXC5 875 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 CACNG4Q9UBN1 327 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 LZTS1Q9Y250 596 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 PPME1Q9Y570 386 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 IPPQ9Y573 584 aa18.21■□□□□ 0.51
COLCA2-206ENST00000638573 PI4K2BG5E9Z4 385 aa18.2■□□□□ 0.5
COLCA2-206ENST00000638573 DGAT1O75907 488 aa18.2■□□□□ 0.5
COLCA2-206ENST00000638573 ERLIN2O94905 339 aa18.2■□□□□ 0.5
COLCA2-206ENST00000638573 EYA4O95677 639 aa18.2■□□□□ 0.5
COLCA2-206ENST00000638573 F13A1P00488 732 aa18.2■□□□□ 0.5
COLCA2-206ENST00000638573 ARF4P18085 180 aaPredicted RBP18.2■□□□□ 0.5
COLCA2-206ENST00000638573 SP100P23497 879 aaPredicted RBP18.2■□□□□ 0.5
COLCA2-206ENST00000638573 CSPP1Q1MSJ5 1256 aa18.2■□□□□ 0.5
COLCA2-206ENST00000638573 SYCE2Q6PIF2 218 aa18.2■□□□□ 0.5
COLCA2-206ENST00000638573 FAM43BQ6ZT52 329 aaPredicted RBP18.2■□□□□ 0.5
COLCA2-206ENST00000638573 PPP2R3CQ969Q6 453 aa18.2■□□□□ 0.5
COLCA2-206ENST00000638573 ZFP42Q96MM3 310 aa18.2■□□□□ 0.5
COLCA2-206ENST00000638573 CCDC43Q96MW1 224 aaKnown RBP18.2■□□□□ 0.5
COLCA2-206ENST00000638573 ZNF396Q96N95 335 aaPredicted RBP18.2■□□□□ 0.5
COLCA2-206ENST00000638573 MRPL9Q9BYD2 267 aaKnown RBP18.2■□□□□ 0.5
COLCA2-206ENST00000638573 RSAD1Q9HA92 442 aa18.2■□□□□ 0.5
COLCA2-206ENST00000638573 LRWD1Q9UFC0 647 aa18.2■□□□□ 0.5
COLCA2-206ENST00000638573 C2orf71A6NGG8 1288 aa18.19■□□□□ 0.5
COLCA2-206ENST00000638573 LRRIQ4A6NIV6 560 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms