RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SLC30A10Q6XR72 485 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 FBXO25Q8TCJ0 367 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 KCNQ5Q9NR82 932 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 SNX24Q9Y343 169 aa21.71■■□□□ 1.07
SYNGAP1-227ENST00000638142 P4HA2O15460 535 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 CFBP00751 764 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 SHBGP04278 402 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 STAT2P52630 851 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 SLC27A3Q5K4L6 730 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 INTS8Q75QN2 995 aaKnown RBP21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 TAX1BP1Q86VP1 789 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 GPATCH11Q8N954 259 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 HOOK2Q96ED9 719 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 RPS6KC1Q96S38 1066 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 ZSWIM1Q9BR11 485 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 EHMT1Q9H9B1 1298 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 SLC40A1Q9NP59 571 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 CNOT7Q9UIV1 285 aaKnown RBP21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 FTLP02792 175 aaPredicted RBP21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 POLR2MP0CAP2 368 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 CTNNA2P26232 953 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 STRIP1Q5VSL9 837 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 DBNDD1Q9H9R9 158 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 GRHL1Q9NZI5 618 aa21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 WRAP73Q9P2S5 460 aaPredicted RBP21.7■■□□□ 1.06
SYNGAP1-227ENST00000638142 PHF20L1A8MW92 1017 aa21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 MMP13P45452 471 aa21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 GPC5P78333 572 aa21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 CEP55Q53EZ4 464 aa21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 PRELID2Q8N945 189 aa21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 MORC4Q8TE76 937 aa21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 SLC20A1Q8WUM9 679 aa21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 RNF25Q96BH1 459 aaPredicted RBP21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 C18orf8Q96DM3 657 aa21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 JPH2Q9BR39 696 aaPredicted RBP21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 UBE2TQ9NPD8 197 aaPredicted RBP21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 MTRF1LQ9UGC7 380 aaKnown RBP21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 ATRNL1Q5VV63 1379 aa21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 CTNND1O60716 968 aaKnown RBP21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 MDM1Q8TC05 714 aa21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 TMEM174Q8WUU8 243 aa21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 ZKSCAN4Q969J2 545 aaPredicted RBP21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 CXorf56Q9H5V9 222 aa21.69■■□□□ 1.06
SYNGAP1-227ENST00000638142 A0A1W2PRG0 241 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 ARHGEF35A5YM69 484 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 DNM1LO00429 736 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 BACH1O14867 736 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 JAG1P78504 1218 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 KRT35Q92764 455 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 ZNF577Q9BSK1 485 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 UNC45AQ9H3U1 944 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 EMSYQ7Z589 1322 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 RPTORQ8N122 1335 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 LOXHD1Q8IVV2 1947 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 HIP1RO75146 1068 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 MTA2O94776 668 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 ADCY2Q08462 1091 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 C6orf118Q5T5N4 469 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 SEL1L2Q5TEA6 688 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 SPICE1Q8N0Z3 855 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 RDH13Q8NBN7 331 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 RUNDC3BQ96NL0 473 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 LXNQ9BS40 222 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 TMEM109Q9BVC6 243 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 KDM4CQ9H3R0 1056 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 SERPINA10Q9UK55 444 aa21.68■■□□□ 1.06
SYNGAP1-227ENST00000638142 MYH11P35749 1972 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 SPATA31A6Q5VVP1 1343 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 RGS16O15492 202 aaPredicted RBP21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 RTN2O75298 545 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 AGTP01019 485 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 GHRP10912 638 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 CHN1P15882 459 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 ALCAMQ13740 583 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 DACT2Q5SW24 774 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 B3GNT9Q6UX72 402 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 COL23A1Q86Y22 540 aaPredicted RBP21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 BANK1Q8NDB2 785 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 ZNF317Q96PQ6 595 aaPredicted RBP21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 TEKT3Q9BXF9 490 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 WNT8AQ9H1J5 351 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 TMEM206Q9H813 350 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 CD248Q9HCU0 757 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 VIL1P09327 827 aaKnown RBP21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 RDXP35241 583 aaKnown RBP21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 RPL21P46778 160 aaKnown RBP21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 PEX5P50542 639 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 VAMP7P51809 220 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 SLC29A2Q14542 456 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 EPC2Q52LR7 807 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 AADACL2Q6P093 401 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 RPUSD2Q8IZ73 545 aaKnown RBP21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 DAW1Q8N136 415 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 CCT6BQ92526 530 aa21.67■■□□□ 1.06
SYNGAP1-227ENST00000638142 K7ENM7 598 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 ENTPD3O75355 529 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 MMEP08473 750 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 MAPTP10636 758 aaKnown RBP21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 ALAS1P13196 640 aa21.66■■□□□ 1.06
SYNGAP1-227ENST00000638142 SCTRP47872 440 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms