RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 APOL5Q9BWW9 433 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 SNX5Q9Y5X3 404 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 WDR47O94967 919 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 LARGE1O95461 756 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 TCP1P17987 556 aaKnown RBP18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 FOXP1Q9H334 677 aaPredicted RBP18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 PCDHA6Q9UN73 950 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 PCDHA8Q9Y5H6 950 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 CTNND1O60716 968 aaKnown RBP18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 MZF1P28698 734 aaPredicted RBP18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 MRPS15P82914 257 aaKnown RBP18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 COMMD2Q86X83 199 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 RNF25Q96BH1 459 aaPredicted RBP18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 FAM136AQ96C01 138 aa18.04■□□□□ 0.48
CACNA1A-253ENST00000637927 SLC16A4O15374 487 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 PER1O15534 1290 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 ECE2O60344 883 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 TBC1D1Q86TI0 1168 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 DPF3Q92784 378 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 ELAC2Q9BQ52 826 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 RSPH9Q9H1X1 276 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 TMEM206Q9H813 350 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 UBE3CQ15386 1083 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 CRLF3Q8IUI8 442 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 TTLL6Q8N841 843 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 WDR11Q9BZH6 1224 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 PRAMEP78395 509 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 SCARA3Q6AZY7 606 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 APPL2Q8NEU8 664 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 PAGE5Q96GU1 130 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 SPACA7Q96KW9 195 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 CCDC17Q96LX7 622 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 BHMT2Q9H2M3 363 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 FAM217BQ9NTX9 383 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 GOLGA8QA0A0J9YX86 632 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 GOLGA8OA6NCC3 632 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 GOLGA8NF8WBI6 632 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 SH2B2O14492 632 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 RBM6P78332 1123 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 SH2D3AQ9BRG2 576 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 GTF2H3Q13889 308 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 ARMC6Q6NXE6 501 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 TRIM48Q8IWZ4 208 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 NSUN7Q8NE18 718 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 PIGBQ92521 554 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 TMEM94Q12767 1356 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 ABCC12Q96J65 1359 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 TRIM49BA6NDI0 452 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 POTEMA6NI47 508 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 PRRG1O14668 218 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 COPS2P61201 443 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 SNRNP48Q6IEG0 339 aaKnown RBP18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 SLC44A5Q8NCS7 719 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 GIMAP4Q9NUV9 329 aa18.03■□□□□ 0.48
CACNA1A-253ENST00000637927 UBE4BO95155 1302 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 C5orf58C9J3I9 102 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 MXI1P50539 228 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 PAPOLAP51003 745 aaKnown RBP18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 LRRC14Q15048 493 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 ZNF746Q6NUN9 644 aaPredicted RBP18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 ANKMY2Q8IV38 441 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 CCDC33Q8N5R6 958 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 TTC8Q8TAM2 541 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 PLXNC1O60486 1568 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 ATP10DQ9P241 1426 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 CHRNA3P32297 505 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 IYDQ6PHW0 289 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 MMP19Q99542 508 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 PARVBQ9HBI1 364 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 ZNF211Q13398 564 aaPredicted RBP18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 C1orf146Q5VVC0 180 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 PAWRQ96IZ0 340 aaKnown RBP18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 BBS2Q9BXC9 721 aa18.02■□□□□ 0.48
CACNA1A-253ENST00000637927 NANOGNBQ7Z5D8 188 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 DHX38Q92620 1227 aaKnown RBP18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 TM6SF1Q9BZW5 370 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 ZNF212Q9UDV6 495 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 USP17L15C9J2P7 530 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 USP17L13C9JLJ4 530 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 USP17L11C9JVI0 530 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 USP17L18D6R9N7 530 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 USP17L22D6RA61 530 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 USP17L17D6RBQ6 530 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 USP17L19D6RCP7 530 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 USP17L20D6RJB6 530 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 USP17L24Q0WX57 530 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 RCSD1Q6JBY9 416 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 USP17L6PQ6QN14 398 aa18.02■□□□□ 0.47
CACNA1A-253ENST00000637927 DARSP14868 501 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-253ENST00000637927 GRK2P25098 689 aa18.01■□□□□ 0.47
CACNA1A-253ENST00000637927 KCNJ6P48051 423 aa18.01■□□□□ 0.47
CACNA1A-253ENST00000637927 OCA2Q04671 838 aa18.01■□□□□ 0.47
CACNA1A-253ENST00000637927 MAN2A1Q16706 1144 aa18.01■□□□□ 0.47
CACNA1A-253ENST00000637927 PRAMEF18Q5VWM3 479 aa18.01■□□□□ 0.47
CACNA1A-253ENST00000637927 TBC1D9BQ66K14 1250 aa18.01■□□□□ 0.47
CACNA1A-253ENST00000637927 LRRC31Q6UY01 552 aa18.01■□□□□ 0.47
CACNA1A-253ENST00000637927 PNMA6FA0A0J9YX94 578 aa18.01■□□□□ 0.47
CACNA1A-253ENST00000637927 RASGRF1Q13972 1273 aa18.01■□□□□ 0.47
CACNA1A-253ENST00000637927 THEGQ9P2T0 379 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms