RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 TAS1R1Q7RTX1 841 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 CATSPER4Q7RTX7 472 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 CDR2LQ86X02 465 aaPredicted RBP8.74□□□□□ -1.01
PNKP-229ENST00000637897 ADHFE1Q8IWW8 467 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 SLFN12Q8IYM2 578 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 THNSL1Q8IYQ7 743 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 LRRC43Q8N309 656 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 LRRC15Q8TF66 581 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 PSPC1Q8WXF1 523 aaKnown RBP8.74□□□□□ -1.01
PNKP-229ENST00000637897 WASF1Q92558 559 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 CPB2Q96IY4 423 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 ZSCAN31Q96LW9 406 aaPredicted RBP8.74□□□□□ -1.01
PNKP-229ENST00000637897 TCF25Q9BQ70 676 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 ZBP1Q9H171 429 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 ANKEF1Q9NU02 776 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 MARCH5Q9NX47 278 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 CD207Q9UJ71 328 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 USP15Q9Y4E8 981 aaPredicted RBP8.74□□□□□ -1.01
PNKP-229ENST00000637897 PCDHB12Q9Y5F1 795 aa8.74□□□□□ -1.01
PNKP-229ENST00000637897 WDFY4Q6ZS81 3184 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 INPPL1O15357 1258 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 NCK2O43639 380 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 CLASP2O75122 1294 aaKnown RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 ARF4P18085 180 aaPredicted RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 SFPQP23246 707 aaKnown RBP eCLIP8.73□□□□□ -1.01
PNKP-229ENST00000637897 U2AF2P26368 475 aaKnown RBP eCLIP8.73□□□□□ -1.01
PNKP-229ENST00000637897 TECP42680 631 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 NDUFV1P49821 464 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 POLGP54098 1239 aaPredicted RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 CBX2Q14781 532 aaPredicted RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 PUS10Q3MIT2 529 aaKnown RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 NOMO2Q5JPE7 1267 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 SPOUT1Q5T280 376 aaKnown RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 TWF2Q6IBS0 349 aaKnown RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 POTEGQ6S5H5 508 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 SRGAP1Q7Z6B7 1085 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 RNF168Q8IYW5 571 aaPredicted RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 MRPL43Q8N983 215 aaKnown RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 SLC7A3Q8WY07 619 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 IGSF21Q96ID5 467 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 C8orf76Q96K31 380 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 SNX27Q96L92 541 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 ZNF558Q96NG5 402 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 SCLT1Q96NL6 688 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 MTRQ99707 1265 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 NAP1L4Q99733 375 aaKnown RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 LLPHQ9BRT6 129 aaKnown RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 MMTAG2Q9BU76 263 aaKnown RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 FOXP1Q9H334 677 aaPredicted RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 TLE6Q9H808 572 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 SH2B1Q9NRF2 756 aaPredicted RBP8.73□□□□□ -1.01
PNKP-229ENST00000637897 FOXD4L1Q9NU39 408 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 DACT1Q9NYF0 836 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 SPG21Q9NZD8 308 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 CACNG4Q9UBN1 327 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 PRKAG3Q9UGI9 489 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 MUTYHQ9UIF7 546 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 PPME1Q9Y570 386 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 IPPQ9Y573 584 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 PCDHB6Q9Y5E3 794 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 MYO10Q9HD67 2058 aa8.73□□□□□ -1.01
PNKP-229ENST00000637897 PP2D1A8MPX8 630 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 GOLGA6L22H0YM25 854 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 HOXA2O43364 376 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 USO1O60763 962 aaKnown RBP8.72□□□□□ -1.01
PNKP-229ENST00000637897 ZC3H11AO75152 810 aaKnown RBP eCLIP8.72□□□□□ -1.01
PNKP-229ENST00000637897 NCLP19338 710 aaKnown RBP8.72□□□□□ -1.01
PNKP-229ENST00000637897 DNM2P50570 870 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 CDC42EP1Q00587 391 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 POU5F1BQ06416 359 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 DSC1Q08554 894 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 CDCA2Q69YH5 1023 aaPredicted RBP8.72□□□□□ -1.01
PNKP-229ENST00000637897 ANKRD54Q6NXT1 300 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 MAEAQ7L5Y9 396 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 KCNK18Q7Z418 384 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 RNF135Q8IUD6 432 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 COLGALT2Q8IYK4 626 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 SLC22A17Q8WUG5 538 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 ZFP42Q96MM3 310 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 POLR3CQ9BUI4 534 aaPredicted RBP8.72□□□□□ -1.01
PNKP-229ENST00000637897 APOL5Q9BWW9 433 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 NFKBIZQ9BYH8 718 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 CCDC113Q9H0I3 377 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 POLR3FQ9H1D9 316 aaPredicted RBP8.72□□□□□ -1.01
PNKP-229ENST00000637897 NXF3Q9H4D5 531 aaKnown RBP8.72□□□□□ -1.01
PNKP-229ENST00000637897 AAASQ9NRG9 546 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 INPP5FQ9Y2H2 1132 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 HCFC2Q9Y5Z7 792 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 ZDBF2Q9HCK1 2354 aa8.72□□□□□ -1.01
PNKP-229ENST00000637897 DOCK6Q96HP0 2047 aa8.71□□□□□ -1.01
PNKP-229ENST00000637897 MEFVO15553 781 aaPredicted RBP8.71□□□□□ -1.02
PNKP-229ENST00000637897 ASAP2O43150 1006 aa8.71□□□□□ -1.02
PNKP-229ENST00000637897 DKC1O60832 514 aaKnown RBP eCLIP8.71□□□□□ -1.02
PNKP-229ENST00000637897 DGAT1O75907 488 aa8.71□□□□□ -1.02
PNKP-229ENST00000637897 BAG4O95429 457 aaKnown RBP8.71□□□□□ -1.02
PNKP-229ENST00000637897 POMCP01189 267 aa8.71□□□□□ -1.02
PNKP-229ENST00000637897 WEE2P0C1S8 567 aa8.71□□□□□ -1.02
PNKP-229ENST00000637897 OR52Z1P0C646 297 aa8.71□□□□□ -1.02
PNKP-229ENST00000637897 CTSAP10619 480 aa8.71□□□□□ -1.02
PNKP-229ENST00000637897 XRCC6P12956 609 aaKnown RBP eCLIP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms