RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 BTNL10A8MVZ5 291 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 DNM1LO00429 736 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 NFIBO00712 420 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 MMEP08473 750 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 ALDH1B1P30837 517 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 RPL21P46778 160 aaKnown RBP15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 PPATQ06203 517 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 MOXD1Q6UVY6 613 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 RASGEF1CQ8N431 466 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 ATG4AQ8WYN0 398 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 SEC16BQ96JE7 1060 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 PSMD1Q99460 953 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 TMEM39BQ9GZU3 492 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 CD2APQ9Y5K6 639 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 ACSL3O95573 720 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 DLATP10515 647 aaKnown RBP15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 MYCLP12524 364 aaPredicted RBP15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 ITGB5P18084 799 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 CIITAP33076 1130 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 PMS2P54278 862 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 MIER3Q7Z3K6 550 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 CBWD2Q8IUF1 395 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 ARFGAP2Q8N6H7 521 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 GMCL1Q96IK5 515 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 OSBPL7Q9BZF2 842 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 CHN1P15882 459 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 EIF2AK2P19525 551 aaKnown RBP15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 POU5F1Q01860 360 aaKnown RBP15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 PRELID2Q8N945 189 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 ADAM33Q9BZ11 813 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 SLITRK6Q9H5Y7 841 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 HAUS2Q9NVX0 235 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 NENFQ9UMX5 172 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 ANKRD62A6NC57 917 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 TRAPPC3O43617 180 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 VAMP7P51809 220 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 PTENP60484 403 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 FAM102BQ5T8I3 360 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 DENND2CQ68D51 928 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 CCDC137Q6PK04 289 aaKnown RBP15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 MICALCLQ6ZW33 695 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 NOP9Q86U38 636 aaKnown RBP15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 LDHDQ86WU2 507 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 CEP57Q86XR8 500 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 COL20A1Q9P218 1284 aa15.13■□□□□ 0.01
CACNA1A-228ENST00000636610 VIMP08670 466 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 CREB1P16220 341 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 FNTAP49354 379 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 PRUNE1Q86TP1 453 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 IPO4Q8TEX9 1081 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 SCLT1Q96NL6 688 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 FAM114A2Q9NRY5 505 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 KCNH7Q9NS40 1196 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 CLDN3O15551 220 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 ALAS1P13196 640 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 KRT5P13647 590 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 MAPK7Q13164 816 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 LONRF1Q17RB8 773 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 LRIG3Q6UXM1 1119 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 GMCL1P1Q8NEA9 526 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 MASTLQ96GX5 879 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 DDX23Q9BUQ8 820 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 TEKT3Q9BXF9 490 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 HEMGNQ9BXL5 484 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 IDI2Q9BXS1 227 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 RAB17Q9H0T7 212 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 MYH11P35749 1972 aa15.12■□□□□ 0.01
CACNA1A-228ENST00000636610 C21orf2O43822 256 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 BCRP11274 1271 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 MTMR3Q13615 1198 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 STRIP1Q5VSL9 837 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 DUPD1Q68J44 220 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 SEPT14Q6ZU15 432 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 PRMT1Q99873 361 aaKnown RBP15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 TBK1Q9UHD2 729 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 ZHX2Q9Y6X8 837 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 KLRG2A4D1S0 409 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 RGS16O15492 202 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 PPIP5K2O43314 1243 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 VCAM1P19320 739 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 CACNA2D3Q8IZS8 1091 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 LMO3Q8TAP4 145 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 NEK9Q8TD19 979 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 SEMA4DQ92854 862 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 SLC5A5Q92911 643 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 ZNF653Q96CK0 615 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 ELAC2Q9BQ52 826 aaKnown RBP15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 NUP85Q9BW27 656 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 EPB41L4BQ9H329 900 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 QTRT2Q9H974 415 aaKnown RBP15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 ARHGEF10LQ9HCE6 1279 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 TUFT1Q9NNX1 390 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 HSPBP1Q9NZL4 362 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 CCPG1Q9ULG6 757 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 A0A0A6YYK5 440 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 KIAA0391O15091 583 aaKnown RBP15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 EIF3DO15371 548 aaKnown RBP eCLIP15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 CPP00450 1065 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 ADRB2P07550 413 aa15.11■□□□□ 0.01
CACNA1A-228ENST00000636610 SSR1P43307 286 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms