RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 RAB27AP51159 221 aa20.43■□□□□ 0.86
CLN6-214ENST00000636314 TFDP1Q14186 410 aa20.43■□□□□ 0.86
CLN6-214ENST00000636314 ZNF598Q86UK7 904 aaKnown RBP20.43■□□□□ 0.86
CLN6-214ENST00000636314 COLGALT1Q8NBJ5 622 aa20.43■□□□□ 0.86
CLN6-214ENST00000636314 CASD1Q96PB1 797 aa20.43■□□□□ 0.86
CLN6-214ENST00000636314 POLR3CQ9BUI4 534 aaPredicted RBP20.43■□□□□ 0.86
CLN6-214ENST00000636314 TRAIPQ9BWF2 469 aa20.43■□□□□ 0.86
CLN6-214ENST00000636314 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.43■□□□□ 0.86
CLN6-214ENST00000636314 PCDHB6Q9Y5E3 794 aa20.43■□□□□ 0.86
CLN6-214ENST00000636314 A0A087WWV3 80 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 FSD2A1L4K1 749 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 ERLIN2O94905 339 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 RPA1P27694 616 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 TOB1P50616 345 aaPredicted RBP20.42■□□□□ 0.86
CLN6-214ENST00000636314 FXR2P51116 673 aaKnown RBP eCLIP20.42■□□□□ 0.86
CLN6-214ENST00000636314 ERVFC1P60507 584 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 DUSP6Q16828 381 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 CLLU1OSQ5K130 101 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 PLPP4Q5VZY2 271 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 POTEGQ6S5H5 508 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 FBXL6Q8N531 539 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 VN1R2Q8NFZ6 395 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 HELQQ8TDG4 1101 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 NACC1Q96RE7 527 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 CDCA3Q99618 268 aaPredicted RBP20.42■□□□□ 0.86
CLN6-214ENST00000636314 PRRX2Q99811 253 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 CWH43Q9H720 699 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 MINDY3Q9H8M7 445 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 FAM105AQ9NUU6 356 aa20.42■□□□□ 0.86
CLN6-214ENST00000636314 SRGAP2BP0DMP2 458 aa20.41■□□□□ 0.86
CLN6-214ENST00000636314 SIGLEC14Q08ET2 396 aa20.41■□□□□ 0.86
CLN6-214ENST00000636314 PTGDRQ13258 359 aa20.41■□□□□ 0.86
CLN6-214ENST00000636314 C4orf32Q8N8J7 132 aa20.41■□□□□ 0.86
CLN6-214ENST00000636314 ASAP3Q8TDY4 903 aa20.41■□□□□ 0.86
CLN6-214ENST00000636314 MRPL9Q9BYD2 267 aaKnown RBP20.41■□□□□ 0.86
CLN6-214ENST00000636314 RAB34Q9BZG1 259 aa20.41■□□□□ 0.86
CLN6-214ENST00000636314 POLR3FQ9H1D9 316 aaPredicted RBP20.41■□□□□ 0.86
CLN6-214ENST00000636314 LRWD1Q9UFC0 647 aa20.41■□□□□ 0.86
CLN6-214ENST00000636314 DBR1Q9UK59 544 aaKnown RBP20.41■□□□□ 0.86
CLN6-214ENST00000636314 USP34Q70CQ2 3546 aa20.41■□□□□ 0.86
CLN6-214ENST00000636314 LAD1O00515 517 aa20.4■□□□□ 0.86
CLN6-214ENST00000636314 ARL2P36404 184 aa20.4■□□□□ 0.86
CLN6-214ENST00000636314 CCT6AP40227 531 aaKnown RBP20.4■□□□□ 0.86
CLN6-214ENST00000636314 CAPSQ13938 189 aa20.4■□□□□ 0.86
CLN6-214ENST00000636314 RILPL1Q5EBL4 403 aa20.4■□□□□ 0.86
CLN6-214ENST00000636314 PDE12Q6L8Q7 609 aaKnown RBP20.4■□□□□ 0.86
CLN6-214ENST00000636314 MCPH1Q8NEM0 835 aa20.4■□□□□ 0.86
CLN6-214ENST00000636314 RSPH1Q8WYR4 309 aa20.4■□□□□ 0.86
CLN6-214ENST00000636314 SUSD6Q92537 303 aa20.4■□□□□ 0.86
CLN6-214ENST00000636314 APOL5Q9BWW9 433 aa20.4■□□□□ 0.86
CLN6-214ENST00000636314 ARHGEF35A5YM69 484 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 INO80B-WBP1J3KQ70 363 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 FSCN2O14926 492 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 MUTP22033 750 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 PTENP60484 403 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 TCF15Q12870 199 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 PCBP1Q15365 356 aaKnown RBP eCLIP20.39■□□□□ 0.85
CLN6-214ENST00000636314 LONRF3Q496Y0 759 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 LLGL2Q6P1M3 1020 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 LRRC55Q6ZSA7 311 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 MAEAQ7L5Y9 396 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 LPPQ93052 612 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 ZNF558Q96NG5 402 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 BACH2Q9BYV9 841 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 ENTPD7Q9NQZ7 604 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.39■□□□□ 0.85
CLN6-214ENST00000636314 STK24Q9Y6E0 443 aa20.39■□□□□ 0.85
CLN6-214ENST00000636314 ZDBF2Q9HCK1 2354 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 GLRA2P23416 452 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 SP100P23497 879 aaPredicted RBP20.38■□□□□ 0.85
CLN6-214ENST00000636314 PPM1AP35813 382 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 POU5F1BQ06416 359 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 ANKRD54Q6NXT1 300 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 KCNT2Q6UVM3 1135 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 GLB1LQ6UWU2 654 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 ZBTB33Q86T24 672 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 IFNLR1Q8IU57 520 aaPredicted RBP20.38■□□□□ 0.85
CLN6-214ENST00000636314 SNX29Q8TEQ0 813 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 MRPS27Q92552 414 aaKnown RBP20.38■□□□□ 0.85
CLN6-214ENST00000636314 PGBD4Q96DM1 585 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 GPRC5CQ9NQ84 441 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 FAM86C1Q9NVL1 165 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 PCDHB2Q9Y5E7 798 aa20.38■□□□□ 0.85
CLN6-214ENST00000636314 LRRIQ4A6NIV6 560 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 TSPAN1O60635 241 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 ZNF623O75123 536 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 AXLP30530 894 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 PBX3P40426 434 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 PRPHP41219 470 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 VCPP55072 806 aaKnown RBP20.37■□□□□ 0.85
CLN6-214ENST00000636314 MBTD1Q05BQ5 628 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 NCBP1Q09161 790 aaKnown RBP20.37■□□□□ 0.85
CLN6-214ENST00000636314 PDIA5Q14554 519 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 PTPN21Q16825 1174 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 LARP1BQ659C4 914 aaKnown RBP20.37■□□□□ 0.85
CLN6-214ENST00000636314 IGSF22Q8N9C0 903 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 TCF25Q9BQ70 676 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 NFKBIZQ9BYH8 718 aa20.37■□□□□ 0.85
CLN6-214ENST00000636314 PUF60Q9UHX1 559 aaKnown RBP20.37■□□□□ 0.85
CLN6-214ENST00000636314 LZTS1Q9Y250 596 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms