RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 FGF14Q92915 247 aa20.51■□□□□ 0.87
CLN6-212ENST00000636020 HERC2P3Q9BVR0 1158 aa20.51■□□□□ 0.87
CLN6-212ENST00000636020 GCOM2Q9BZD3 368 aaPredicted RBP20.51■□□□□ 0.87
CLN6-212ENST00000636020 PLEKHA4Q9H4M7 779 aa20.51■□□□□ 0.87
CLN6-212ENST00000636020 TBC1D22BQ9NU19 505 aa20.51■□□□□ 0.87
CLN6-212ENST00000636020 ZFP37Q9Y6Q3 630 aaPredicted RBP20.51■□□□□ 0.87
CLN6-212ENST00000636020 CNOT1A5YKK6 2376 aaKnown RBP20.5■□□□□ 0.87
CLN6-212ENST00000636020 RAB27AP51159 221 aa20.5■□□□□ 0.87
CLN6-212ENST00000636020 AFF1P51825 1210 aaKnown RBP20.5■□□□□ 0.87
CLN6-212ENST00000636020 WWC2Q6AWC2 1192 aa20.5■□□□□ 0.87
CLN6-212ENST00000636020 PARM1Q6UWI2 310 aa20.5■□□□□ 0.87
CLN6-212ENST00000636020 RSPO2Q6UXX9 243 aaPredicted RBP20.5■□□□□ 0.87
CLN6-212ENST00000636020 AGMOQ6ZNB7 445 aa20.5■□□□□ 0.87
CLN6-212ENST00000636020 URGCPQ8TCY9 931 aa20.5■□□□□ 0.87
CLN6-212ENST00000636020 PHKBQ93100 1093 aa20.5■□□□□ 0.87
CLN6-212ENST00000636020 CLDN23Q96B33 292 aa20.5■□□□□ 0.87
CLN6-212ENST00000636020 PRKD2Q9BZL6 878 aa20.5■□□□□ 0.87
CLN6-212ENST00000636020 LTB4R2Q9NPC1 389 aa20.5■□□□□ 0.87
CLN6-212ENST00000636020 ZDHHC7Q9NXF8 308 aa20.5■□□□□ 0.87
CLN6-212ENST00000636020 PIN4Q9Y237 131 aaKnown RBP20.5■□□□□ 0.87
CLN6-212ENST00000636020 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.5■□□□□ 0.87
CLN6-212ENST00000636020 MYH15Q9Y2K3 1946 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 ASPMQ8IZT6 3477 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 ZNF862O60290 1169 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 EFEMP2O95967 443 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 C1RP00736 705 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 SPEM2Q0P670 501 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 DRP2Q13474 957 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 TSSK4Q6SA08 328 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 TMTC2Q8N394 836 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 ZNF577Q9BSK1 485 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 MTA3Q9BTC8 594 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 NRBP2Q9NSY0 501 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 DOCK6Q96HP0 2047 aa20.49■□□□□ 0.87
CLN6-212ENST00000636020 MTCL1Q9Y4B5 1905 aaKnown RBP20.49■□□□□ 0.87
CLN6-212ENST00000636020 GAS2O43903 313 aaKnown RBP20.48■□□□□ 0.87
CLN6-212ENST00000636020 OATP04181 439 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 CALM1P0DP23 149 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 CALM2P0DP24 149 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 CALM3P0DP25 149 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 CD72P21854 359 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 SFPQP23246 707 aaKnown RBP eCLIP20.48■□□□□ 0.87
CLN6-212ENST00000636020 CLK2P49760 499 aaKnown RBP20.48■□□□□ 0.87
CLN6-212ENST00000636020 ADCY7P51828 1080 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 NAPAP54920 295 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 CDC42EP1Q00587 391 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 AP3B2Q13367 1082 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 ZBTB41Q5SVQ8 909 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 DIEXFQ68CQ4 756 aaKnown RBP20.48■□□□□ 0.87
CLN6-212ENST00000636020 B4GALNT3Q6L9W6 998 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 NFXL1Q6ZNB6 911 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 TMTC3Q6ZXV5 915 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 RNF168Q8IYW5 571 aaPredicted RBP20.48■□□□□ 0.87
CLN6-212ENST00000636020 CRYGNQ8WXF5 182 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 PGBD4Q96DM1 585 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 FAM193BQ96PV7 902 aaPredicted RBP20.48■□□□□ 0.87
CLN6-212ENST00000636020 FAM126AQ9BYI3 521 aaPredicted RBP20.48■□□□□ 0.87
CLN6-212ENST00000636020 PRMT8Q9NR22 394 aaPredicted RBP20.48■□□□□ 0.87
CLN6-212ENST00000636020 MARCH5Q9NX47 278 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 KANSL3Q9P2N6 904 aa20.48■□□□□ 0.87
CLN6-212ENST00000636020 A0A087WZ62 844 aa20.47■□□□□ 0.87
CLN6-212ENST00000636020 CCDC69A6NI79 296 aa20.47■□□□□ 0.87
CLN6-212ENST00000636020 GLUD2P49448 558 aa20.47■□□□□ 0.87
CLN6-212ENST00000636020 CASC1Q6TDU7 716 aa20.47■□□□□ 0.87
CLN6-212ENST00000636020 CHD1LQ86WJ1 897 aa20.47■□□□□ 0.87
CLN6-212ENST00000636020 PALB2Q86YC2 1186 aa20.47■□□□□ 0.87
CLN6-212ENST00000636020 SMC5Q8IY18 1101 aa20.47■□□□□ 0.87
CLN6-212ENST00000636020 FDXACB1Q9BRP7 624 aaPredicted RBP20.47■□□□□ 0.87
CLN6-212ENST00000636020 PCDHB2Q9Y5E7 798 aa20.47■□□□□ 0.87
CLN6-212ENST00000636020 WDR81Q562E7 1941 aa20.47■□□□□ 0.87
CLN6-212ENST00000636020 ZZEF1O43149 2961 aa20.46■□□□□ 0.87
CLN6-212ENST00000636020 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.46■□□□□ 0.87
CLN6-212ENST00000636020 SH2B2O14492 632 aaPredicted RBP20.46■□□□□ 0.87
CLN6-212ENST00000636020 TGM5O43548 720 aa20.46■□□□□ 0.87
CLN6-212ENST00000636020 CYP3A4P08684 503 aa20.46■□□□□ 0.87
CLN6-212ENST00000636020 FSHRP23945 695 aa20.46■□□□□ 0.87
CLN6-212ENST00000636020 RPS9P46781 194 aaKnown RBP20.46■□□□□ 0.87
CLN6-212ENST00000636020 DSG1Q02413 1049 aa20.46■□□□□ 0.87
CLN6-212ENST00000636020 TARBP2Q15633 366 aaKnown RBP20.46■□□□□ 0.87
CLN6-212ENST00000636020 PPP1R18Q6NYC8 613 aa20.46■□□□□ 0.87
CLN6-212ENST00000636020 LILRA6Q6PI73 481 aa20.46■□□□□ 0.87
CLN6-212ENST00000636020 MRPL10Q7Z7H8 261 aaKnown RBP20.46■□□□□ 0.87
CLN6-212ENST00000636020 RAB11FIP4Q86YS3 637 aa20.46■□□□□ 0.87
CLN6-212ENST00000636020 FANCBQ8NB91 859 aa20.46■□□□□ 0.87
CLN6-212ENST00000636020 INO80BQ9C086 356 aaPredicted RBP20.46■□□□□ 0.87
CLN6-212ENST00000636020 TCEAL9Q9UHQ7 104 aa20.46■□□□□ 0.87
CLN6-212ENST00000636020 ANGPTL2Q9UKU9 493 aa20.46■□□□□ 0.87
CLN6-212ENST00000636020 CDH7Q9ULB5 785 aa20.46■□□□□ 0.87
CLN6-212ENST00000636020 FASNP49327 2511 aaKnown RBP20.46■□□□□ 0.87
CLN6-212ENST00000636020 PRC1O43663 620 aa20.45■□□□□ 0.86
CLN6-212ENST00000636020 TARSP26639 723 aaKnown RBP20.45■□□□□ 0.86
CLN6-212ENST00000636020 PRKCEQ02156 737 aa20.45■□□□□ 0.86
CLN6-212ENST00000636020 DMWDQ09019 674 aa20.45■□□□□ 0.86
CLN6-212ENST00000636020 LAIR1Q6GTX8 287 aa20.45■□□□□ 0.86
CLN6-212ENST00000636020 NELL2Q99435 816 aa20.45■□□□□ 0.86
CLN6-212ENST00000636020 RSAD1Q9HA92 442 aa20.45■□□□□ 0.86
CLN6-212ENST00000636020 PRG3Q9Y2Y8 225 aaPredicted RBP20.45■□□□□ 0.86
CLN6-212ENST00000636020 SAMM50Q9Y512 469 aa20.45■□□□□ 0.86
CLN6-212ENST00000636020 SMCO2A6NFE2 343 aa20.44■□□□□ 0.86
CLN6-212ENST00000636020 LRP3O75074 770 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms