RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 TBC1D8O95759 1140 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 ECE1P42892 770 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 VSIG10LQ86VR7 867 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 ANKS4BQ8N8V4 417 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 EXTL3O43909 919 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 AKAP3O75969 853 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 SLC9A1P19634 815 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 MTMR2Q13614 643 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 ZPBP2Q6X784 338 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 TMEM39BQ9GZU3 492 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 WDR35Q9P2L0 1181 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 ADAM21Q9UKJ8 722 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 TBX20Q9UMR3 447 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 EMSYQ7Z589 1322 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 RPTORQ8N122 1335 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 TMEM191BP0C7N4 346 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 VCAM1P19320 739 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 HADHBP55084 474 aaKnown RBP4.9□□□□□ -1.62
SCN1A-210ENST00000635776 SPIRE1Q08AE8 756 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 BAATQ14032 418 aaPredicted RBP4.9□□□□□ -1.62
SCN1A-210ENST00000635776 ZFPM1Q8IX07 1006 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 KLHL7Q8IXQ5 586 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF653Q96CK0 615 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 ANKRD36BP1Q96IX9 119 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 KRT12Q99456 494 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 INO80BQ9C086 356 aaPredicted RBP4.9□□□□□ -1.62
SCN1A-210ENST00000635776 EPB41L5Q9HCM4 733 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 RAB20Q9NX57 234 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 GABBR1Q9UBS5 961 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 A0A1W2PRG0 241 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 VWA5AO00534 786 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 MAGEB2O15479 319 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 EVI5O60447 810 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 GMPSP49915 693 aaPredicted RBP4.9□□□□□ -1.62
SCN1A-210ENST00000635776 VSNL1P62760 191 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 SNRNP35Q16560 246 aaKnown RBP4.9□□□□□ -1.62
SCN1A-210ENST00000635776 IER5Q5VY09 327 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 GPC2Q8N158 579 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 CCDC89Q8N998 374 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 RDH13Q8NBN7 331 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 TMEM35BQ8NCS4 154 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 BANK1Q8NDB2 785 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 LACRTQ9GZZ8 138 aa4.9□□□□□ -1.62
SCN1A-210ENST00000635776 F8VZ95 297 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 KLRC1P26715 233 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 SSR1P43307 286 aaKnown RBP4.9□□□□□ -1.63
SCN1A-210ENST00000635776 GALCP54803 685 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 SLC8A3P57103 927 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 PTPN21Q16825 1174 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 MUM1L1Q5H9M0 696 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 CCDC105Q8IYK2 499 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 INPP4AQ96PE3 977 aaPredicted RBP4.9□□□□□ -1.63
SCN1A-210ENST00000635776 MRPL4Q9BYD3 311 aaKnown RBP4.9□□□□□ -1.63
SCN1A-210ENST00000635776 AVENQ9NQS1 362 aaPredicted RBP4.9□□□□□ -1.63
SCN1A-210ENST00000635776 MYH7P12883 1935 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 HMGB3O15347 200 aaKnown RBP4.9□□□□□ -1.63
SCN1A-210ENST00000635776 ECEL1O95672 775 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 NCKAP1LP55160 1127 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 UBXN2AP68543 259 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 DR1Q01658 176 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 MAPK6Q16659 721 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 NOL9Q5SY16 702 aaKnown RBP4.9□□□□□ -1.63
SCN1A-210ENST00000635776 CYFIP1Q7L576 1253 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 LENG9Q96B70 501 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 EEF2KMTQ96G04 330 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 CAPS2Q9BXY5 557 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 SYNCQ9H7C4 482 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 CYP2C19P33261 490 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 NR1H3Q13133 447 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 KIF22Q14807 665 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 ZSCAN26Q16670 478 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 CD302Q8IX05 232 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 CENPHQ9H3R5 247 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 DMAC2Q9NW81 257 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 NOC2LQ9Y3T9 749 aaKnown RBP4.9□□□□□ -1.63
SCN1A-210ENST00000635776 ARP10275 920 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 ABCB4P21439 1286 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 FNTAP49354 379 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 EVX2Q03828 476 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 ADCY2Q08462 1091 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 TTLL4Q14679 1199 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 SEPT7Q16181 437 aaKnown RBP4.9□□□□□ -1.63
SCN1A-210ENST00000635776 AMIGO3Q86WK7 504 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 MAP7D3Q8IWC1 876 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 HACE1Q8IYU2 909 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 ANKRD13AQ8IZ07 590 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 MREGQ8N565 214 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 DYDC1Q8WWB3 177 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 HPS3Q969F9 1004 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 CCDC127Q96BQ5 260 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 MROH8Q9H579 483 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 TMEM134Q9H6X4 195 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 HACL1Q9UJ83 578 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 PCDHA2Q9Y5H9 948 aa4.9□□□□□ -1.63
SCN1A-210ENST00000635776 LRRIQ4A6NIV6 560 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 CAPN15O75808 1086 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 FTCDO95954 541 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 CNGA1P29973 690 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 MAPK4P31152 587 aa4.89□□□□□ -1.63
SCN1A-210ENST00000635776 DENND2CQ68D51 928 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms