RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 K7ERI5 159 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 ACKR2O00590 384 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 B4GALT5O43286 388 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 SKIP12755 728 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 ATF7P17544 494 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-210ENST00000635675 CMA1P23946 247 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 ZNF131P52739 623 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 NCBP1Q09161 790 aaKnown RBP10.74□□□□□ -0.69
LINC00339-210ENST00000635675 MAPK6Q16659 721 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 MRPL10Q7Z7H8 261 aaKnown RBP10.74□□□□□ -0.69
LINC00339-210ENST00000635675 IQUBQ8NA54 791 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 DNAJC19Q96DA6 116 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 CCDC51Q96ER9 411 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 CPB2Q96IY4 423 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 CUEDC2Q9H467 287 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 TMEM134Q9H6X4 195 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 KMT5AQ9NQR1 393 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 FAM105AQ9NUU6 356 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 RNF19AQ9NV58 838 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 KBTBD4Q9NVX7 518 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 MTMR10Q9NXD2 777 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 FAM13BQ9NYF5 915 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 LARSQ9P2J5 1176 aaKnown RBP10.74□□□□□ -0.69
LINC00339-210ENST00000635675 PCDHB2Q9Y5E7 798 aa10.74□□□□□ -0.69
LINC00339-210ENST00000635675 FAM237AA0A1B0GTK4 181 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 SLC16A4O15374 487 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 POLR2DO15514 142 aaKnown RBP10.73□□□□□ -0.69
LINC00339-210ENST00000635675 EDN1P05305 212 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 PRKCBP05771 671 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 KRT18P05783 430 aaKnown RBP10.73□□□□□ -0.69
LINC00339-210ENST00000635675 LINC00271P0C7V0 271 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 FGFR1P11362 822 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 GATMP50440 423 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 RAB27AP51159 221 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 SMTNP53814 917 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 ERVK-21P61565 698 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 GRIN2CQ14957 1233 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 NOTUMQ6P988 496 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 TAS1R3Q7RTX0 852 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 SPRED2Q7Z698 418 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 CMTR2Q8IYT2 770 aaKnown RBP10.73□□□□□ -0.69
LINC00339-210ENST00000635675 TMEM161BQ8NDZ6 487 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 DDX12PQ92771 950 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 KCNN1Q92952 543 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 DHX58Q96C10 678 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 FAM161BQ96MY7 647 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 EIF2AQ9BY44 585 aaKnown RBP10.73□□□□□ -0.69
LINC00339-210ENST00000635675 PARVGQ9HBI0 331 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 GDPD2Q9HCC8 539 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 KCNH3Q9ULD8 1083 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 HPSEQ9Y251 543 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 USP20Q9Y2K6 914 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 CNTNAP2Q9UHC6 1331 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 MYO9BQ13459 2157 aa10.73□□□□□ -0.69
LINC00339-210ENST00000635675 FNDC1Q4ZHG4 1894 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-210ENST00000635675 PHLPP2Q6ZVD8 1323 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 A0A1B0GVL5 298 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 A0A1W2PQ27 194 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 A0A1W2PQ64 194 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 A0A1W2PQD8 194 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 HOXA2O43364 376 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 FAM13AO94988 1023 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 MAPTP10636 758 aaKnown RBP10.72□□□□□ -0.69
LINC00339-210ENST00000635675 LIG1P18858 919 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 IBSPP21815 317 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-210ENST00000635675 NCKAP1LP55160 1127 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 PRPF4BQ13523 1007 aaKnown RBP10.72□□□□□ -0.69
LINC00339-210ENST00000635675 BTG3Q14201 252 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-210ENST00000635675 CLLU1OSQ5K130 101 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 NT5DC1Q5TFE4 455 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 SLC27A1Q6PCB7 646 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 DYMQ7RTS9 669 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 CDR2LQ86X02 465 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-210ENST00000635675 FIBCD1Q8N539 461 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 MYCT1Q8N699 235 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 RNF169Q8NCN4 708 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 SMG8Q8ND04 991 aaKnown RBP10.72□□□□□ -0.69
LINC00339-210ENST00000635675 GUCD1Q96NT3 240 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 CASD1Q96PB1 797 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 TGS1Q96RS0 853 aaKnown RBP10.72□□□□□ -0.69
LINC00339-210ENST00000635675 FIZ1Q96SL8 496 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 TMEM117Q9H0C3 514 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 TNMDQ9H2S6 317 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 CHMP5Q9NZZ3 219 aa10.72□□□□□ -0.69
LINC00339-210ENST00000635675 FRMD3A2A2Y4 597 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 MEIS3P2A8K0S8 358 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 TRAK2O60296 914 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 TBCAO75347 108 aaKnown RBP10.71□□□□□ -0.69
LINC00339-210ENST00000635675 PFKFB1P16118 471 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 SCP2P22307 547 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 CNNM4Q6P4Q7 775 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 AGMOQ6ZNB7 445 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 HAUS6Q7Z4H7 955 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 CNNM3Q8NE01 707 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 STAMQ92783 540 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 CLP1Q92989 425 aaKnown RBP10.71□□□□□ -0.69
LINC00339-210ENST00000635675 LPPQ93052 612 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 PGBD4Q96DM1 585 aa10.71□□□□□ -0.69
LINC00339-210ENST00000635675 CDX2Q99626 313 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-210ENST00000635675 PYM1Q9BRP8 204 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms