RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 PANK2Q9BZ23 570 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 SEMA6BQ9H3T3 888 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 TMEM134Q9H6X4 195 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 MAGEF1Q9HAY2 307 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 POLD4Q9HCU8 107 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 KMT5AQ9NQR1 393 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 FAM105AQ9NUU6 356 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 ARHGAP28Q9P2N2 729 aa16.27■□□□□ 0.2
CDC42BPB-209ENST00000634889 RALGAPA2Q2PPJ7 1873 aa16.27■□□□□ 0.19
CDC42BPB-209ENST00000634889 NPHP3-ACAD11A0A0J9YXS1 232 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 A0A1B0GUA9 196 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 LINC01553A4QN01 128 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 SFI1A8K8P3 1242 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 K7ERI5 159 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 ACKR2O00590 384 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 TBCAO75347 108 aaKnown RBP16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 FAM13AO94988 1023 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 PRKCBP05771 671 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 PRPF4BQ13523 1007 aaKnown RBP16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 ZNF598Q86UK7 904 aaKnown RBP16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 CNNM3Q8NE01 707 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 KCNN1Q92952 543 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 LRRC27Q9C0I9 530 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 TNMDQ9H2S6 317 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 PARVGQ9HBI0 331 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 KCNH3Q9ULD8 1083 aa16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 FNDC1Q4ZHG4 1894 aaPredicted RBP16.26■□□□□ 0.19
CDC42BPB-209ENST00000634889 B4GALT5O43286 388 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 ARHGEF15O94989 841 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 ATF7P17544 494 aaPredicted RBP16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 ABCD1P33897 745 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 CACNB1Q02641 598 aaPredicted RBP16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 BTG3Q14201 252 aaPredicted RBP16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 UBXN11Q5T124 520 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 SLC27A1Q6PCB7 646 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 Q7L0L9 218 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 FIBCD1Q8N539 461 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 TMEM161BQ8NDZ6 487 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 DDX12PQ92771 950 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 DHX58Q96C10 678 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 PGBD4Q96DM1 585 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 CPB2Q96IY4 423 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 SAMD11Q96NU1 681 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 TGS1Q96RS0 853 aaKnown RBP16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 KBTBD4Q9NVX7 518 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 MTMR10Q9NXD2 777 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 CHMP5Q9NZZ3 219 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 PCDHB2Q9Y5E7 798 aa16.25■□□□□ 0.19
CDC42BPB-209ENST00000634889 A0A1W2PQ27 194 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 A0A1W2PQ64 194 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 A0A1W2PQD8 194 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 MYMKA6NI61 221 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 N4BP3O15049 544 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 SLC16A4O15374 487 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 POLR2DO15514 142 aaKnown RBP16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 FGFR1P11362 822 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 IBSPP21815 317 aaPredicted RBP16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 NCKAP1LP55160 1127 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 ERVK-21P61565 698 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 AMPD3Q01432 767 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 DYMQ7RTS9 669 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 MRPL10Q7Z7H8 261 aaKnown RBP16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 ABI1Q8IZP0 508 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 MYCT1Q8N699 235 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 SLC17A8Q8NDX2 589 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 TMEM117Q9H0C3 514 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 SEL1LQ9UBV2 794 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 RWDD3Q9Y3V2 267 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 NLRC5Q86WI3 1866 aa16.24■□□□□ 0.19
CDC42BPB-209ENST00000634889 FAM237AA0A1B0GTK4 181 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 TRAK2O60296 914 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 PFKFB1P16118 471 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 STRN3Q13033 797 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 GRIN2CQ14957 1233 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 CNNM4Q6P4Q7 775 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 HACE1Q8IYU2 909 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 RNF169Q8NCN4 708 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 CLP1Q92989 425 aaKnown RBP16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 DNAJC19Q96DA6 116 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 FAM161BQ96MY7 647 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 ADPGKQ9BRR6 497 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 MRPL4Q9BYD3 311 aaKnown RBP16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 TRIM6Q9C030 488 aaPredicted RBP16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 PDZD7Q9H5P4 517 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 GDPD2Q9HCC8 539 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 UBN1Q9NPG3 1134 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 RNF19AQ9NV58 838 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 USP25Q9UHP3 1055 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 HPSEQ9Y251 543 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 CDH23Q9H251 3354 aa16.23■□□□□ 0.19
CDC42BPB-209ENST00000634889 TRANK1O15050 2925 aa16.22■□□□□ 0.19
CDC42BPB-209ENST00000634889 TBKBP1A7MCY6 615 aa16.22■□□□□ 0.19
CDC42BPB-209ENST00000634889 EDN1P05305 212 aa16.22■□□□□ 0.19
CDC42BPB-209ENST00000634889 LINC00271P0C7V0 271 aa16.22■□□□□ 0.19
CDC42BPB-209ENST00000634889 MAPTP10636 758 aaKnown RBP16.22■□□□□ 0.19
CDC42BPB-209ENST00000634889 GAP43P17677 238 aa16.22■□□□□ 0.19
CDC42BPB-209ENST00000634889 LIG1P18858 919 aa16.22■□□□□ 0.19
CDC42BPB-209ENST00000634889 TMEM132AQ24JP5 1023 aa16.22■□□□□ 0.19
CDC42BPB-209ENST00000634889 CLLU1OSQ5K130 101 aa16.22■□□□□ 0.19
CDC42BPB-209ENST00000634889 ATF7IP2Q5U623 682 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms