RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 SMOC2Q9H3U7 446 aa17.38■□□□□ 0.37
SNRNP48-203ENST00000634363 NRDE2Q9H7Z3 1164 aa17.38■□□□□ 0.37
SNRNP48-203ENST00000634363 FAM105AQ9NUU6 356 aa17.38■□□□□ 0.37
SNRNP48-203ENST00000634363 LIMD1Q9UGP4 676 aa17.38■□□□□ 0.37
SNRNP48-203ENST00000634363 FAM205CA6NFA0 338 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 MEIS3P2A8K0S8 358 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 GFRA3O60609 400 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 STBD1O95210 358 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 SKIP12755 728 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 PPP4R3AQ6IN85 833 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 UBALD2Q8IYN6 164 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 RDM1Q8NG50 284 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 IGSF21Q96ID5 467 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 ZBP1Q9H171 429 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 IRF2BPLQ9H1B7 796 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 TBC1D13Q9NVG8 400 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 DNAJB4Q9UDY4 337 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 ZDBF2Q9HCK1 2354 aa17.37■□□□□ 0.37
SNRNP48-203ENST00000634363 MARCH6O60337 910 aa17.36■□□□□ 0.37
SNRNP48-203ENST00000634363 OFD1O75665 1012 aa17.36■□□□□ 0.37
SNRNP48-203ENST00000634363 SSBP05455 408 aaKnown RBP eCLIP17.36■□□□□ 0.37
SNRNP48-203ENST00000634363 GALTP07902 379 aa17.36■□□□□ 0.37
SNRNP48-203ENST00000634363 PLA2G4FQ68DD2 849 aa17.36■□□□□ 0.37
SNRNP48-203ENST00000634363 TMC5Q6UXY8 1006 aa17.36■□□□□ 0.37
SNRNP48-203ENST00000634363 DDX53Q86TM3 631 aaKnown RBP17.36■□□□□ 0.37
SNRNP48-203ENST00000634363 CABP7Q86V35 215 aa17.36■□□□□ 0.37
SNRNP48-203ENST00000634363 ZNF410Q86VK4 478 aa17.36■□□□□ 0.37
SNRNP48-203ENST00000634363 TDRD5Q8NAT2 981 aaKnown RBP17.36■□□□□ 0.37
SNRNP48-203ENST00000634363 MBOAT7Q96N66 472 aa17.36■□□□□ 0.37
SNRNP48-203ENST00000634363 CEP89Q96ST8 783 aa17.36■□□□□ 0.37
SNRNP48-203ENST00000634363 IGKV6-21A0A0C4DH24 114 aa17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 SLC37A4O43826 429 aa17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 MAFO75444 373 aaPredicted RBP17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 CTSAP10619 480 aa17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 POLGP54098 1239 aaPredicted RBP17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 GIT2Q14161 759 aa17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 LARP1BQ659C4 914 aaKnown RBP17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 MCTP1Q6DN14 999 aa17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 ANO5Q75V66 913 aa17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 ZNF280BQ86YH2 543 aa17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 NOSTRINQ8IVI9 506 aa17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 BCL7CQ8WUZ0 217 aaPredicted RBP17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 INTS4Q96HW7 963 aaKnown RBP17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 TRAIPQ9BWF2 469 aa17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 MFSD1Q9H3U5 465 aa17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 DZANK1Q9NVP4 752 aa17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 NOL7Q9UMY1 257 aaKnown RBP17.35■□□□□ 0.37
SNRNP48-203ENST00000634363 HSP90AA1P07900 732 aaKnown RBP17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 SRGAP2CP0DJJ0 459 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 PDCP20941 246 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 KLRC2P26717 231 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 SLC11A1P49279 550 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 NPEPPSP55786 919 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 PSMC5P62195 406 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 KIAA1841Q6NSI8 718 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 PLCD3Q8N3E9 789 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 FEZF2Q8TBJ5 459 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 URGCPQ8TCY9 931 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 SLC22A17Q8WUG5 538 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 PGBD4Q96DM1 585 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 FAM193BQ96PV7 902 aaPredicted RBP17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 PCDHB2Q9Y5E7 798 aa17.34■□□□□ 0.37
SNRNP48-203ENST00000634363 CARNS1A5YM72 827 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 EML1O00423 815 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 TBX3O15119 743 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 GALR2O43603 387 aaPredicted RBP17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 NEMFO60524 1076 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 ZNF623O75123 536 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 BAG4O95429 457 aaKnown RBP17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 ALDH2P05091 517 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 ATP2B1P20020 1258 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 RAB27AP51159 221 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 B3GNT9Q6UX72 402 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 POTEDQ86YR6 584 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 ZDHHC14Q8IZN3 488 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 TMEM105Q8N8V8 129 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 ZNF579Q8NAF0 562 aaKnown RBP17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 ETNPPLQ8TBG4 499 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 TMEM143Q96AN5 459 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 FAM20AQ96MK3 541 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 JPH2Q9BR39 696 aaPredicted RBP17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 IFT122Q9HBG6 1241 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 CYP26B1Q9NR63 512 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 BMP2KQ9NSY1 1161 aaPredicted RBP17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 IRAK3Q9Y616 596 aa17.33■□□□□ 0.36
SNRNP48-203ENST00000634363 DDHD2O94830 711 aa17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 U2AF2P26368 475 aaKnown RBP eCLIP17.32■□□□□ 0.365e-6■□□□□ 8.7
SNRNP48-203ENST00000634363 QARSP47897 775 aaKnown RBP17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 AGMOQ6ZNB7 445 aa17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 PPFIBP1Q86W92 1011 aa17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 SLFN12Q8IYM2 578 aa17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 PRPF31Q8WWY3 499 aaKnown RBP17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 SLC7A3Q8WY07 619 aa17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 RSPH1Q8WYR4 309 aa17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 ACSF2Q96CM8 615 aaPredicted RBP17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 CEP170P1Q96L14 293 aa17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 KLHL5Q96PQ7 755 aa17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 EMILIN2Q9BXX0 1053 aa17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 KCNMB3Q9NPA1 279 aa17.32■□□□□ 0.36
SNRNP48-203ENST00000634363 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms