RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 V9GYY5 206 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-213ENST00000630925 RHPN2P1A8MT19 583 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 K7EPI3 171 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 DDX39AO00148 427 aaKnown RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 AGRPO00253 132 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 MYO1BO43795 1136 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 B3GALT2O43825 422 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 PAGE1O75459 146 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 ERAL1O75616 437 aaKnown RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 FGF18O76093 207 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 SNRNP70P08621 437 aaKnown RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 TOP1P11387 765 aaKnown RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 MAPK4P31152 587 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 GRIA2P42262 883 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 TLE2Q04725 743 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 FOXO1Q12778 655 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 STARD3Q14849 445 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 ARID5BQ14865 1188 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 ARHGEF6Q15052 776 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 TRIP4Q15650 581 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 C1orf141Q5JVX7 400 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 UBXN11Q5T124 520 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 ANGPTL8Q6UXH0 198 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 UNC5AQ6ZN44 842 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 UBE2R2Q712K3 238 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 B4GALNT4Q76KP1 1039 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 SYTL1Q8IYJ3 562 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 AFAP1Q8N556 730 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 C2orf69Q8N8R5 385 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 CHST13Q8NET6 341 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 OR6C4Q8NGE1 309 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 GDAP1Q8TB36 358 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 WNK4Q96J92 1243 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 CABS1Q96KC9 395 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 PPP1R13BQ96KQ4 1090 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 CEP295NLQ96MC4 621 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 RUNDC3BQ96NL0 473 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 DACH2Q96NX9 599 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 GBP4Q96PP9 640 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 LRFN3Q9BTN0 628 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 HGH1Q9BTY7 390 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 BRIP1Q9BX63 1249 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 NACA2Q9H009 215 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 PHAXQ9H814 394 aaKnown RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 SPTLC3Q9NUV7 552 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 CORO2BQ9UQ03 480 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 SLC12A7Q9Y666 1083 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 A0A1W2PP55 124 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 TBKBP1A7MCY6 615 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 ACKR2O00590 384 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 KHNYNO15037 678 aaKnown RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 NMT2O60551 498 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 EFCAB14O75071 495 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 ZPR1O75312 459 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 SEC22BO75396 215 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 GJB3O75712 270 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 RTN3O95197 1032 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 STAMBPO95630 424 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 PDHA1P08559 390 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 COL6A2P12110 1019 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 CTSSP25774 331 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 PSMC4P43686 418 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 LSSP48449 732 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 IFNAR2P48551 515 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 ITGA8P53708 1063 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 CASP6P55212 293 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 ERVK-9P63128 1117 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 RBP5P82980 135 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 GEN1Q17RS7 908 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 NPNTQ6UXI9 565 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 GBP6Q6ZN66 633 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 MTERF4Q7Z6M4 381 aaKnown RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 COL23A1Q86Y22 540 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 ATG16L2Q8NAA4 619 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 MYO3AQ8NEV4 1616 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 CTCFLQ8NI51 663 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 CEP76Q8TAP6 659 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 ZDHHC1Q8WTX9 485 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.33□□□□□ -1.564e-7■□□□□ 10.7
SDCBP-213ENST00000630925 RUBCNQ92622 972 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 TMEM169Q96HH4 297 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 UTP14AQ9BVJ6 771 aaKnown RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 MXD3Q9BW11 206 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 EHD4Q9H223 541 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 LATS2Q9NRM7 1088 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 PTBP2Q9UKA9 531 aaKnown RBP5.33□□□□□ -1.56
SDCBP-213ENST00000630925 GRID1Q9ULK0 1009 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 PCDHGB4Q9UN71 923 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 TLL2Q9Y6L7 1015 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 AP1M2Q9Y6Q5 423 aa5.33□□□□□ -1.56
SDCBP-213ENST00000630925 STRCP1A6NGW2 1772 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 LRP6O75581 1613 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 NPATQ14207 1427 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 PASKQ96RG2 1323 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 hCG_1807616A0A1W2PRN6 198 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 POLR3GO15318 223 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-213ENST00000630925 THAP12O43422 761 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 SMPD2O60906 423 aa5.32□□□□□ -1.56
SDCBP-213ENST00000630925 UBXN7O94888 489 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms