RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 EHBP1Q8NDI1 1231 aa12.79□□□□□ -0.36
CCDC163-201ENST00000625766 SMC1BQ8NDV3 1235 aa12.79□□□□□ -0.36
CCDC163-201ENST00000625766 LMO3Q8TAP4 145 aa12.79□□□□□ -0.36
CCDC163-201ENST00000625766 AFG1LQ8WV93 481 aa12.79□□□□□ -0.36
CCDC163-201ENST00000625766 CCDC42Q96M95 316 aa12.79□□□□□ -0.36
CCDC163-201ENST00000625766 C16orf70Q9BSU1 422 aa12.79□□□□□ -0.36
CCDC163-201ENST00000625766 REXO2Q9Y3B8 237 aaKnown RBP12.79□□□□□ -0.36
CCDC163-201ENST00000625766 PLXNA1Q9UIW2 1896 aa12.79□□□□□ -0.36
CCDC163-201ENST00000625766 PHLPP2Q6ZVD8 1323 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.78□□□□□ -0.36
CCDC163-201ENST00000625766 KIF3CO14782 793 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 HNRNPDLO14979 420 aaKnown RBP12.78□□□□□ -0.36
CCDC163-201ENST00000625766 MAGEB2O15479 319 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 SERPING1P05155 500 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 ACTN1P12814 892 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 MARK3P27448 753 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 GTF2H1P32780 548 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 CETN1Q12798 172 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 CAPSQ13938 189 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 CBWD6Q4V339 395 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 CBWD3Q5JTY5 395 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 CBWD5Q5RIA9 395 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 OLFML2BQ68BL8 750 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 CDCA2Q69YH5 1023 aaPredicted RBP12.78□□□□□ -0.36
CCDC163-201ENST00000625766 PARD3BQ8TEW8 1205 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 PSPC1Q8WXF1 523 aaKnown RBP12.78□□□□□ -0.36
CCDC163-201ENST00000625766 POMGNT1Q8WZA1 660 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 NLRC4Q9NPP4 1024 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 ZNF236Q9UL36 1845 aa12.78□□□□□ -0.36
CCDC163-201ENST00000625766 TMEM88BA6NKF7 163 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 CA12O43570 354 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 DLG4P78352 724 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 LAMTOR4Q0VGL1 99 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 DRP2Q13474 957 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 SLC9C1Q4G0N8 1177 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 GJC2Q5T442 439 aaPredicted RBP12.77□□□□□ -0.36
CCDC163-201ENST00000625766 ZPBP2Q6X784 338 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 IRF2BP2Q7Z5L9 587 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 USP37Q86T82 979 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 GPD1LQ8N335 351 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 ACRBPQ8NEB7 543 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 ZSWIM2Q8NEG5 633 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 PLEKHO2Q8TD55 490 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 STK33Q9BYT3 514 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 HAUS4Q9H6D7 363 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 SUGCTQ9HAC7 445 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.36
CCDC163-201ENST00000625766 GCNT4Q9P109 453 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 MYO1AQ9UBC5 1043 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 TRPC6Q9Y210 931 aa12.77□□□□□ -0.36
CCDC163-201ENST00000625766 BZW2Q9Y6E2 419 aaKnown RBP12.77□□□□□ -0.36
CCDC163-201ENST00000625766 COL1A2P08123 1366 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 LRRIQ4A6NIV6 560 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 EXTL3O43909 919 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 LDHAP00338 332 aaKnown RBP12.77□□□□□ -0.37
CCDC163-201ENST00000625766 INSRRP14616 1297 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 ARHGAP25P42331 645 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 LIG4P49917 911 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 JAM2P57087 298 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 CLDN10P78369 228 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 APBA1Q02410 837 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 PPP3CAQ08209 521 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 SYT10Q6XYQ8 523 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 CBWD2Q8IUF1 395 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 VTI1AQ96AJ9 217 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 NFKBIZQ9BYH8 718 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 C2orf40Q9H1Z8 148 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 SUCLA2Q9P2R7 463 aaPredicted RBP12.77□□□□□ -0.37
CCDC163-201ENST00000625766 GNEQ9Y223 722 aaKnown RBP12.77□□□□□ -0.37
CCDC163-201ENST00000625766 COQ4Q9Y3A0 265 aa12.77□□□□□ -0.37
CCDC163-201ENST00000625766 A6NJR5 290 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 ZNF233A6NK53 670 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 H3BRB1 525 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 RBAK-RBAKDNI3L0D1 243 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 MSCO60682 206 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 ADRB2P07550 413 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 TRIM49P0CI25 452 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 TRIM49CP0CI26 452 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 ZNF865P0CJ78 1059 aaPredicted RBP12.76□□□□□ -0.37
CCDC163-201ENST00000625766 RFX1P22670 979 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 EIF4A3P38919 411 aaKnown RBP12.76□□□□□ -0.37
CCDC163-201ENST00000625766 RGS2P41220 211 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 PRKCIP41743 596 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 TNFAIP2Q03169 654 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 DGKDQ16760 1214 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 EFCAB12Q6NXP0 572 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 FMNL3Q8IVF7 1028 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 LINC01465Q8N7H1 131 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 MYRIPQ8NFW9 859 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 SOCS4Q8WXH5 440 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 BICD1Q96G01 975 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 CCDC113Q9H0I3 377 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 TUT1Q9H6E5 874 aaKnown RBP12.76□□□□□ -0.37
CCDC163-201ENST00000625766 Q9Y3F1 56 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 A0A0B4J269 797 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 GOLGA8IPA6NC78 632 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 GOLGA8JA6NMD2 632 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 IPO7O95373 1038 aaKnown RBP12.76□□□□□ -0.37
CCDC163-201ENST00000625766 C22orf31O95567 290 aa12.76□□□□□ -0.37
CCDC163-201ENST00000625766 ALDH1A1P00352 501 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms