RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 JAMLQ86YT9 394 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 KAT5Q92993 513 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 C18orf8Q96DM3 657 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 MXRA8Q9BRK3 442 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 ZDHHC18Q9NUE0 388 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 RFX1P22670 979 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 GRIPAP1Q4V328 841 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 MMS22LQ6ZRQ5 1243 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 TRMT1LQ7Z2T5 733 aaKnown RBP12.16□□□□□ -0.46
VARS2-213ENST00000625423 MIER3Q7Z3K6 550 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 LARSQ9P2J5 1176 aaKnown RBP12.16□□□□□ -0.46
VARS2-213ENST00000625423 ZBTB21Q9ULJ3 1066 aa12.16□□□□□ -0.46
VARS2-213ENST00000625423 H0YIN7 160 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 SHBGP04278 402 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 CHRNA5P30532 468 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 FNTAP49354 379 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 CETN1Q12798 172 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 PPP2R5EQ16537 467 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 QPCTQ16769 361 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 YTHDF3Q7Z739 585 aaKnown RBP12.15□□□□□ -0.46
VARS2-213ENST00000625423 FAM187AA6NFU0 413 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 YDJCA8MPS7 323 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 H0YHG0 523 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 ATMINO43313 823 aaPredicted RBP12.15□□□□□ -0.46
VARS2-213ENST00000625423 CAND2O75155 1236 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 SGPL1O95470 568 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 GPC5P78333 572 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 DHX34Q14147 1143 aaKnown RBP12.15□□□□□ -0.46
VARS2-213ENST00000625423 MYBPC2Q14324 1141 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 MESDQ14696 234 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 TBC1D10BQ4KMP7 808 aaPredicted RBP12.15□□□□□ -0.46
VARS2-213ENST00000625423 EPC2Q52LR7 807 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 C1orf220Q5T0J3 134 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 FBXO25Q8TCJ0 367 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 RAPGEF5Q92565 580 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 PSMD1Q99460 953 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 RIT2Q99578 217 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 EPB41L4BQ9H329 900 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 ACP6Q9NPH0 428 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 KCNH7Q9NS40 1196 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 TMOD2Q9NZR1 351 aa12.15□□□□□ -0.46
VARS2-213ENST00000625423 KIAA0391O15091 583 aaKnown RBP12.15□□□□□ -0.47
VARS2-213ENST00000625423 FSBPO95073 299 aa12.15□□□□□ -0.47
VARS2-213ENST00000625423 HNRNPH1P31943 449 aaKnown RBP12.15□□□□□ -0.47
VARS2-213ENST00000625423 DEFB132Q7Z7B7 95 aa12.15□□□□□ -0.47
VARS2-213ENST00000625423 TEX2Q8IWB9 1127 aa12.15□□□□□ -0.47
VARS2-213ENST00000625423 UBL4BQ8N7F7 174 aa12.15□□□□□ -0.47
VARS2-213ENST00000625423 MDM1Q8TC05 714 aa12.15□□□□□ -0.47
VARS2-213ENST00000625423 PLEKHO2Q8TD55 490 aa12.15□□□□□ -0.47
VARS2-213ENST00000625423 AGBL1Q96MI9 1066 aa12.15□□□□□ -0.47
VARS2-213ENST00000625423 PCDHB18PQ96TA0 734 aa12.15□□□□□ -0.47
VARS2-213ENST00000625423 TMEM206Q9H813 350 aa12.15□□□□□ -0.47
VARS2-213ENST00000625423 VCPKMTQ9H867 229 aa12.15□□□□□ -0.47
VARS2-213ENST00000625423 HSPBP1Q9NZL4 362 aa12.15□□□□□ -0.47
VARS2-213ENST00000625423 DDX20Q9UHI6 824 aaKnown RBP12.15□□□□□ -0.47
VARS2-213ENST00000625423 ZHX2Q9Y6X8 837 aa12.15□□□□□ -0.47
VARS2-213ENST00000625423 SLX4Q8IY92 1834 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 PMS2P54278 862 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 HADHBP55084 474 aaKnown RBP12.14□□□□□ -0.47
VARS2-213ENST00000625423 EIF3BP55884 814 aaKnown RBP12.14□□□□□ -0.47
VARS2-213ENST00000625423 C11orf63Q6NUN7 778 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 KCNV1Q6PIU1 500 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 C6orf89Q6UWU4 347 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 ZDHHC24Q6UX98 284 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 CDAN1Q8IWY9 1227 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 ZDHHC14Q8IZN3 488 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 PRELID2Q8N945 189 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 ACCSQ96QU6 501 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 GLIS2Q9BZE0 524 aaPredicted RBP12.14□□□□□ -0.47
VARS2-213ENST00000625423 TMEM150BA6NC51 233 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 MIF4GDA9UHW6 222 aaKnown RBP12.14□□□□□ -0.47
VARS2-213ENST00000625423 PHF2O75151 1096 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 P4HBP07237 508 aaKnown RBP12.14□□□□□ -0.47
VARS2-213ENST00000625423 COMTP21964 271 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 PTGIRP43119 386 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 MIGA2Q7L4E1 593 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 CNPY4Q8N129 248 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 XXYLT1Q8NBI6 393 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 IL31RAQ8NI17 732 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 SYNGAP1Q96PV0 1343 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 ZSWIM1Q9BR11 485 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 COL20A1Q9P218 1284 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 RASAL2Q9UJF2 1139 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 PNMA2Q9UL42 364 aa12.14□□□□□ -0.47
VARS2-213ENST00000625423 GOLGA8IPA6NC78 632 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 GOLGA8JA6NMD2 632 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 RTN2O75298 545 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 RARRES1P49788 294 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 TTC27Q6P3X3 843 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 NOP9Q86U38 636 aaKnown RBP12.13□□□□□ -0.47
VARS2-213ENST00000625423 CPNE8Q86YQ8 564 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 PRPF38AQ8NAV1 312 aaKnown RBP12.13□□□□□ -0.47
VARS2-213ENST00000625423 NEK9Q8TD19 979 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 RNF25Q96BH1 459 aaPredicted RBP12.13□□□□□ -0.47
VARS2-213ENST00000625423 TLCD1Q96CP7 247 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 BTBD6Q96KE9 485 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 GGA2Q9UJY4 613 aa12.13□□□□□ -0.47
VARS2-213ENST00000625423 RBBP6Q7Z6E9 1792 aaKnown RBP12.13□□□□□ -0.47
VARS2-213ENST00000625423 PFASO15067 1338 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms