RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 NOC4LQ9BVI4 516 aaKnown RBP12.88□□□□□ -0.35
LINC00963-220ENST00000625171 NUP58Q9BVL2 599 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 SEZ6LQ9BYH1 1024 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 EDEM3Q9BZQ6 932 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 ARMCX3Q9UH62 379 aaPredicted RBP12.88□□□□□ -0.35
LINC00963-220ENST00000625171 FRMD4BQ9Y2L6 1034 aa12.88□□□□□ -0.35
LINC00963-220ENST00000625171 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC00963-220ENST00000625171 A0A1W2PPC1 479 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 TEX33O43247 280 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 CABYRO75952 493 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 LDHAP00338 332 aaKnown RBP12.87□□□□□ -0.35
LINC00963-220ENST00000625171 ZNF286BP0CG31 522 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 EPB41P11171 864 aaKnown RBP12.87□□□□□ -0.35
LINC00963-220ENST00000625171 PRKAR2AP13861 404 aaKnown RBP12.87□□□□□ -0.35
LINC00963-220ENST00000625171 ADSSP30520 456 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 STRN3Q13033 797 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 DRP2Q13474 957 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 ARID5BQ14865 1188 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 KIAA0753Q2KHM9 967 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 INTS8Q75QN2 995 aaKnown RBP12.87□□□□□ -0.35
LINC00963-220ENST00000625171 KIAA0319LQ8IZA0 1049 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 XXYLT1Q8NBI6 393 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 PCSK9Q8NBP7 692 aaKnown RBP12.87□□□□□ -0.35
LINC00963-220ENST00000625171 TRIM44Q96DX7 344 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-220ENST00000625171 PRIMPOLQ96LW4 560 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 TSEN34Q9BSV6 310 aaKnown RBP12.87□□□□□ -0.35
LINC00963-220ENST00000625171 HTATIP2Q9BUP3 242 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 VPS16Q9H269 839 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 PRO3102Q9H379 93 aa12.87□□□□□ -0.35
LINC00963-220ENST00000625171 LAMA3Q16787 3333 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 ACKR2O00590 384 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 P4HA2O15460 535 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 GJB1P08034 283 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 SMIM10L2AP0DMW4 78 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 SMIM10L2BP0DMW5 78 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 CAPN2P17655 700 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 SFPQP23246 707 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00963-220ENST00000625171 GJA8P48165 433 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 UBXN1Q04323 297 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 PTPN11Q06124 597 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-220ENST00000625171 MAPK6Q16659 721 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 CCDC40Q4G0X9 1142 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 HSP90AA4PQ58FG1 418 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 GNASQ5JWF2 1037 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 FKBP15Q5T1M5 1219 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 NFRKBQ6P4R8 1299 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 SLC39A4Q6P5W5 647 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 SRGAP1Q7Z6B7 1085 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 UBE2Q1Q7Z7E8 422 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 ZBTB8OSQ8IWT0 167 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 DRC7Q8IY82 874 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 CCDC150Q8NCX0 1101 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 TMC2Q8TDI7 906 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 DPF3Q92784 378 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 CCDC51Q96ER9 411 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 SUGCTQ9HAC7 445 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 IFT122Q9HBG6 1241 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 TAB2Q9NYJ8 693 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
LINC00963-220ENST00000625171 USP20Q9Y2K6 914 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 DAAM1Q9Y4D1 1078 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC00963-220ENST00000625171 NR2E3Q9Y5X4 410 aa12.86□□□□□ -0.35
LINC00963-220ENST00000625171 A0A0B4J269 797 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 A0A1W2PQJ5 194 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 LRRIQ4A6NIV6 560 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 ANKRD63C9JTQ0 380 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 CLIC2O15247 247 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 MYCP01106 439 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-220ENST00000625171 C6orf222P0C671 652 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-220ENST00000625171 FECHP22830 423 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 PROZP22891 400 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 GRK4P32298 578 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 PHKA2P46019 1235 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 CLDN10P78369 228 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 TRIM32Q13049 653 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 ARMCX5Q6P1M9 558 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 TAF2Q6P1X5 1199 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 TSHZ1Q6ZSZ6 1077 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 FAM43BQ6ZT52 329 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-220ENST00000625171 CCDC186Q7Z3E2 898 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 KSR1Q8IVT5 923 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 LRRC8AQ8IWT6 810 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 FAM186BQ8IYM0 893 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 RNF149Q8NC42 400 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 LMBR1Q8WVP7 490 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 TRAPPC12Q8WVT3 735 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 SLC35C1Q96A29 364 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 MFSD14AQ96MC6 490 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 MAP7D2Q96T17 732 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 MRPL4Q9BYD3 311 aaKnown RBP12.85□□□□□ -0.35
LINC00963-220ENST00000625171 TMX1Q9H3N1 280 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 PTPRHQ9HD43 1115 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 HMX1Q9NP08 348 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-220ENST00000625171 XPNPEP3Q9NQH7 507 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 SETD4Q9NVD3 440 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 PRMT7Q9NVM4 692 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-220ENST00000625171 HSPBP1Q9NZL4 362 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 FBXL5Q9UKA1 691 aa12.85□□□□□ -0.35
LINC00963-220ENST00000625171 ZSWIM8A7E2V4 1837 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms