RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 ECM1Q16610 540 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 SPOUT1Q5T280 376 aaKnown RBP13.78□□□□□ -0.2
LINC00963-217ENST00000624009 KCNT2Q6UVM3 1135 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 LRRC55Q6ZSA7 311 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 ZBTB8OSQ8IWT0 167 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 ZNF558Q96NG5 402 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 MMTAG2Q9BU76 263 aaKnown RBP13.78□□□□□ -0.2
LINC00963-217ENST00000624009 COL25A1Q9BXS0 654 aaPredicted RBP13.78□□□□□ -0.2
LINC00963-217ENST00000624009 CSRNP2Q9H175 543 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 BHMT2Q9H2M3 363 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 FZD8Q9H461 694 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 UBE2ZQ9H832 354 aaPredicted RBP13.78□□□□□ -0.2
LINC00963-217ENST00000624009 BMP2KQ9NSY1 1161 aaPredicted RBP13.78□□□□□ -0.2
LINC00963-217ENST00000624009 PUF60Q9UHX1 559 aaKnown RBP13.78□□□□□ -0.2
LINC00963-217ENST00000624009 FGF18O76093 207 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 BMP1P13497 986 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 SYT1P21579 422 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 ALDH7A1P49419 539 aaKnown RBP13.77□□□□□ -0.21
LINC00963-217ENST00000624009 KRT17Q04695 432 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 CTC1Q2NKJ3 1217 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 LEXMQ3ZCV2 418 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 TCEAL5Q5H9L2 206 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 NOMO2Q5JPE7 1267 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 UBXN11Q5T124 520 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 THNSL1Q8IYQ7 743 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 HACE1Q8IYU2 909 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 HELQQ8TDG4 1101 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 POF1BQ8WVV4 589 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 MRPS27Q92552 414 aaKnown RBP13.77□□□□□ -0.21
LINC00963-217ENST00000624009 IFT74Q96LB3 600 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 CDCA3Q99618 268 aaPredicted RBP13.77□□□□□ -0.21
LINC00963-217ENST00000624009 ALG13Q9NP73 1137 aaKnown RBP13.77□□□□□ -0.21
LINC00963-217ENST00000624009 TLR9Q9NR96 1032 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 SPG21Q9NZD8 308 aa13.77□□□□□ -0.21
LINC00963-217ENST00000624009 VWA3AA6NCI4 1184 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 LRRIQ4A6NIV6 560 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 ACKR2O00590 384 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 FSCN2O14926 492 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 OFD1O75665 1012 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 ARF4P18085 180 aaPredicted RBP13.76□□□□□ -0.21
LINC00963-217ENST00000624009 SCP2P22307 547 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 GUCY2CP25092 1073 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 LONP1P36776 959 aaKnown RBP13.76□□□□□ -0.21
LINC00963-217ENST00000624009 SLC27A1Q6PCB7 646 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 RNF169Q8NCN4 708 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 URGCPQ8TCY9 931 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 KCNN1Q92952 543 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 DRC1Q96MC2 740 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 ZSCAN16Q9H4T2 348 aaPredicted RBP13.76□□□□□ -0.21
LINC00963-217ENST00000624009 RSAD1Q9HA92 442 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 NGRNQ9NPE2 291 aaKnown RBP13.76□□□□□ -0.21
LINC00963-217ENST00000624009 GPRC5CQ9NQ84 441 aa13.76□□□□□ -0.21
LINC00963-217ENST00000624009 TRIOO75962 3097 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 DNAJB1P25685 340 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 MAPK6Q16659 721 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 RINT1Q6NUQ1 792 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 AGMOQ6ZNB7 445 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 C1orf186Q6ZWK4 172 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 SLC39A11Q8N1S5 342 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 SMG8Q8ND04 991 aaKnown RBP13.75□□□□□ -0.21
LINC00963-217ENST00000624009 TMEM175Q9BSA9 504 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 NTPCRQ9BSD7 190 aaKnown RBP13.75□□□□□ -0.21
LINC00963-217ENST00000624009 CCDC113Q9H0I3 377 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 TBC1D13Q9NVG8 400 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 FAM50BQ9Y247 325 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 GIT1Q9Y2X7 761 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 RBM19Q9Y4C8 960 aaKnown RBP13.75□□□□□ -0.21
LINC00963-217ENST00000624009 IPPQ9Y573 584 aa13.75□□□□□ -0.21
LINC00963-217ENST00000624009 A0A087WWV3 80 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 VPS37CA5D8V6 355 aaPredicted RBP13.74□□□□□ -0.21
LINC00963-217ENST00000624009 N4BP3O15049 544 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 ITGA4P13612 1032 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 IBSPP21815 317 aaPredicted RBP13.74□□□□□ -0.21
LINC00963-217ENST00000624009 TFF2Q03403 129 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 HYAL1Q12794 435 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 DMP1Q13316 513 aaPredicted RBP13.74□□□□□ -0.21
LINC00963-217ENST00000624009 GIT2Q14161 759 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 BMS1Q14692 1282 aaKnown RBP13.74□□□□□ -0.21
LINC00963-217ENST00000624009 TMEM119Q4V9L6 283 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 APBB1IPQ7Z5R6 666 aaPredicted RBP13.74□□□□□ -0.21
LINC00963-217ENST00000624009 EFHBQ8N7U6 833 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 SYT2Q8N9I0 419 aaPredicted RBP13.74□□□□□ -0.21
LINC00963-217ENST00000624009 DEPTORQ8TB45 409 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 ADAMTS19Q8TE59 1207 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 CDK5RAP3Q96JB5 506 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 TRIM6Q9C030 488 aaPredicted RBP13.74□□□□□ -0.21
LINC00963-217ENST00000624009 TMEM134Q9H6X4 195 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 IRAK3Q9Y616 596 aa13.74□□□□□ -0.21
LINC00963-217ENST00000624009 PP2D1A8MPX8 630 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 E9PMD0 336 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 STX6O43752 255 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 CDC25AP30304 524 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 UBA7P41226 1012 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 BCAR1P56945 870 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 RNASELQ05823 741 aaKnown RBP13.73□□□□□ -0.21
LINC00963-217ENST00000624009 RESTQ13127 1097 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 ADAM15Q13444 863 aa13.73□□□□□ -0.21
LINC00963-217ENST00000624009 PRPF4BQ13523 1007 aaKnown RBP13.73□□□□□ -0.21
LINC00963-217ENST00000624009 SF3A1Q15459 793 aaKnown RBP13.73□□□□□ -0.21
LINC00963-217ENST00000624009 DCAF4L1Q3SXM0 396 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms