RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 RGPD4Q7Z3J3 1758 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 ZNF233A6NK53 670 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 WDR64B1ANS9 1081 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 ANKRD63C9JTQ0 380 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 GOLGA8KD6RF30 607 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 VWA5AO00534 786 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 ZBED4O75132 1171 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 RPS6KA5O75582 802 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 FGGP02679 453 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 DCAF12L1Q5VU92 463 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 PRAMEF18Q5VWM3 479 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 NAA35Q5VZE5 725 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 ANO5Q75V66 913 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 C12orf56Q8IXR9 622 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 SH2D3CQ8N5H7 860 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 POP1Q99575 1024 aaKnown RBP12.96□□□□□ -0.34
TP53-227ENST00000622645 ISCUQ9H1K1 167 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 RGS17Q9UGC6 210 aaPredicted RBP12.96□□□□□ -0.34
TP53-227ENST00000622645 TELO2Q9Y4R8 837 aa12.96□□□□□ -0.34
TP53-227ENST00000622645 ANKRD62A6NC57 917 aa12.95□□□□□ -0.34
TP53-227ENST00000622645 FTLP02792 175 aaPredicted RBP12.95□□□□□ -0.34
TP53-227ENST00000622645 MXI1P50539 228 aa12.95□□□□□ -0.34
TP53-227ENST00000622645 MAP2K1Q02750 393 aaPredicted RBP12.95□□□□□ -0.34
TP53-227ENST00000622645 PRPF4BQ13523 1007 aaKnown RBP12.95□□□□□ -0.34
TP53-227ENST00000622645 TTC19Q6DKK2 380 aaPredicted RBP12.95□□□□□ -0.34
TP53-227ENST00000622645 ADAT2Q7Z6V5 191 aaKnown RBP12.95□□□□□ -0.34
TP53-227ENST00000622645 ZKSCAN4Q969J2 545 aaPredicted RBP12.95□□□□□ -0.34
TP53-227ENST00000622645 ELMO3Q96BJ8 720 aa12.95□□□□□ -0.34
TP53-227ENST00000622645 CELF4Q9BZC1 486 aaKnown RBP12.95□□□□□ -0.34
TP53-227ENST00000622645 MAP3K20Q9NYL2 800 aaKnown RBP12.95□□□□□ -0.34
TP53-227ENST00000622645 DDX3YO15523 660 aaKnown RBP12.95□□□□□ -0.34
TP53-227ENST00000622645 RFX1P22670 979 aa12.95□□□□□ -0.34
TP53-227ENST00000622645 NPTX2P47972 431 aa12.95□□□□□ -0.34
TP53-227ENST00000622645 NCKAP1LP55160 1127 aa12.95□□□□□ -0.34
TP53-227ENST00000622645 TMEM161BQ8NDZ6 487 aa12.95□□□□□ -0.34
TP53-227ENST00000622645 WHAMMQ8TF30 809 aa12.95□□□□□ -0.34
TP53-227ENST00000622645 NEUROG2Q9H2A3 272 aa12.95□□□□□ -0.34
TP53-227ENST00000622645 ST6GALNAC4Q9H4F1 302 aa12.95□□□□□ -0.34
TP53-227ENST00000622645 RNF146Q9NTX7 359 aa12.95□□□□□ -0.34
TP53-227ENST00000622645 CWC15Q9P013 229 aaKnown RBP12.95□□□□□ -0.34
TP53-227ENST00000622645 HACL1Q9UJ83 578 aa12.95□□□□□ -0.34
TP53-227ENST00000622645 CCDC188H7C350 402 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 TULP2O00295 520 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 TTI1O43156 1089 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 SGPL1O95470 568 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 IVLP07476 585 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 CNGA1P29973 690 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 COPB2P35606 906 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 JAK3P52333 1124 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 ZNF280AP59817 542 aaPredicted RBP12.94□□□□□ -0.34
TP53-227ENST00000622645 KRT76Q01546 638 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 SP4Q02446 784 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 ZNF211Q13398 564 aaPredicted RBP12.94□□□□□ -0.34
TP53-227ENST00000622645 SNRNP35Q16560 246 aaKnown RBP12.94□□□□□ -0.34
TP53-227ENST00000622645 FMNL3Q8IVF7 1028 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 MICALL2Q8IY33 904 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 RPUSD2Q8IZ73 545 aaKnown RBP12.94□□□□□ -0.34
TP53-227ENST00000622645 PPM1KQ8N3J5 372 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 MREGQ8N565 214 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 TMEM174Q8WUU8 243 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 SEMA4DQ92854 862 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 LCMT1Q9UIC8 334 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 TBX20Q9UMR3 447 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 P4HA2O15460 535 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 SORBS3O60504 671 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 NR3C2P08235 984 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 IRAK1P51617 712 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 BSNDQ8WZ55 320 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 ALG3Q92685 438 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 PCDHB18PQ96TA0 734 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 RABEP2Q9H5N1 569 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 TMOD4Q9NZQ9 345 aa12.94□□□□□ -0.34
TP53-227ENST00000622645 DENND3A2RUS2 1198 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 NFKBIEO00221 500 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 CYP26A1O43174 497 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 DAPK3O43293 454 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 ZNF862O60290 1169 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 SHOX2O60902 331 aaPredicted RBP12.93□□□□□ -0.34
TP53-227ENST00000622645 SFNP31947 248 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 DALRD3Q5D0E6 543 aaKnown RBP12.93□□□□□ -0.34
TP53-227ENST00000622645 SLC47A2Q86VL8 602 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 VSIG10LQ86VR7 867 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 RNPC3Q96LT9 517 aaKnown RBP12.93□□□□□ -0.34
TP53-227ENST00000622645 KREMEN1Q96MU8 473 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 MOV10L1Q9BXT6 1211 aaKnown RBP12.93□□□□□ -0.34
TP53-227ENST00000622645 CAPS2Q9BXY5 557 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 TOPORSQ9NS56 1045 aaPredicted RBP12.93□□□□□ -0.34
TP53-227ENST00000622645 ANKEF1Q9NU02 776 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 CTTNBP2NLQ9P2B4 639 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 GABBR1Q9UBS5 961 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 PPP1R1BQ9UD71 204 aaPredicted RBP12.93□□□□□ -0.34
TP53-227ENST00000622645 RSPH14Q9UHP6 348 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 PCDHA10Q9Y5I2 948 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 ALG6Q9Y672 507 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 ZBTB7AO95365 584 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 FLT3P36888 993 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 GMPSP49915 693 aaPredicted RBP12.93□□□□□ -0.34
TP53-227ENST00000622645 SMTNP53814 917 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 BACE1P56817 501 aa12.93□□□□□ -0.34
TP53-227ENST00000622645 DMP1Q13316 513 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms