RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CACNB3P54284 484 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 OXCT1P55809 520 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 HDAC4P56524 1084 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 APOBEC3HQ6NTF7 200 aaKnown RBP13.4□□□□□ -0.26
LITAF-221ENST00000622633 SP8Q8IXZ3 490 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 NME8Q8N427 588 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 PRCCQ92733 491 aaPredicted RBP13.4□□□□□ -0.26
LITAF-221ENST00000622633 CAVIN3Q969G5 261 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 TRAPPC9Q96Q05 1148 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 NAP1L4Q99733 375 aaKnown RBP13.4□□□□□ -0.26
LITAF-221ENST00000622633 MOV10L1Q9BXT6 1211 aaKnown RBP13.4□□□□□ -0.26
LITAF-221ENST00000622633 RNF14Q9UBS8 474 aa13.4□□□□□ -0.26
LITAF-221ENST00000622633 ZNF233A6NK53 670 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 EIF3FO00303 357 aaPredicted RBP13.39□□□□□ -0.27
LITAF-221ENST00000622633 TRAPPC3O43617 180 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 CCDC166P0CW27 439 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 HARSP12081 509 aaKnown RBP13.39□□□□□ -0.27
LITAF-221ENST00000622633 EEF2P13639 858 aaKnown RBP13.39□□□□□ -0.27
LITAF-221ENST00000622633 TNFRSF8P28908 595 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 PTK2Q05397 1052 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 TCP10Q12799 353 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 ITGB3BPQ13352 177 aaPredicted RBP13.39□□□□□ -0.27
LITAF-221ENST00000622633 GIT2Q14161 759 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 TRADDQ15628 312 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 TMEM154Q6P9G4 183 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 ZC3H3Q8IXZ2 948 aaKnown RBP13.39□□□□□ -0.27
LITAF-221ENST00000622633 BCAS3Q9H6U6 928 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 GDF3Q9NR23 364 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 SUGT1Q9Y2Z0 365 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 LRRC42Q9Y546 428 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 CYP3A7-CYP3A51PA0A087WV96 503 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 MEIS2O14770 477 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 PFDN1O60925 122 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 PDHA1P08559 390 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 ATP2A2P16615 1042 aaKnown RBP13.39□□□□□ -0.27
LITAF-221ENST00000622633 TAL1P17542 331 aaPredicted RBP13.39□□□□□ -0.27
LITAF-221ENST00000622633 CYP3A7P24462 503 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 HOXD13P35453 343 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 GUCY2FP51841 1108 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 ARHGAP4P98171 946 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 PTPROQ16827 1216 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 SMUG1Q53HV7 270 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 SLFN13Q68D06 897 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 ZNF571Q7Z3V5 609 aaPredicted RBP13.39□□□□□ -0.27
LITAF-221ENST00000622633 IRF2BP2Q7Z5L9 587 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 SFR1Q86XK3 245 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 SMC1BQ8NDV3 1235 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 WHAMMQ8TF30 809 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 GOLPH3Q9H4A6 298 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 DNAJC18Q9H819 358 aa13.39□□□□□ -0.27
LITAF-221ENST00000622633 ARMCX3Q9UH62 379 aaPredicted RBP13.39□□□□□ -0.27
LITAF-221ENST00000622633 CFAP73A6NFT4 308 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 GSTA1P08263 222 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 YY1P25490 414 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 SPIRE1Q08AE8 756 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 EDRF1Q3B7T1 1238 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 DPY19L2P1Q6NXN4 242 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 APBB1IPQ7Z5R6 666 aaPredicted RBP13.38□□□□□ -0.27
LITAF-221ENST00000622633 SLFN12Q8IYM2 578 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 SAMD3Q8N6K7 520 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 CASKIN2Q8WXE0 1202 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 CCDC43Q96MW1 224 aaKnown RBP13.38□□□□□ -0.27
LITAF-221ENST00000622633 INPP4AQ96PE3 977 aaPredicted RBP13.38□□□□□ -0.27
LITAF-221ENST00000622633 REEP2Q9BRK0 252 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 POLR3CQ9BUI4 534 aaPredicted RBP13.38□□□□□ -0.27
LITAF-221ENST00000622633 PCDHAC2Q9Y5I4 1007 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 MYO3BQ8WXR4 1341 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 CCT8L1PA6NM43 557 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 SPATA31C1P0DKV0 1188 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 MYBP10242 640 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 KNOP1Q1ED39 458 aaKnown RBP13.38□□□□□ -0.27
LITAF-221ENST00000622633 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 KLHL7Q8IXQ5 586 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 LMNTD2Q8IXW0 634 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 IQCKQ8N0W5 287 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 ETNPPLQ8TBG4 499 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 MBOAT7Q96N66 472 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 DNM3Q9UQ16 869 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 TAF1LQ8IZX4 1826 aa13.38□□□□□ -0.27
LITAF-221ENST00000622633 PITPNM2Q9BZ72 1349 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 RSPH10B2B2RC85 870 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 KCNK3O14649 394 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 FLOT1O75955 427 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 TRIM37O94972 964 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 RSPH10BP0C881 870 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 UCHL3P15374 230 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 ZFXP17010 805 aaPredicted RBP13.37□□□□□ -0.27
LITAF-221ENST00000622633 PON1P27169 355 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 HOXD12P35452 270 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 PAK2Q13177 524 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 RPS6KA1Q15418 735 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 USH1GQ495M9 461 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 DCAF17Q5H9S7 520 aaPredicted RBP13.37□□□□□ -0.27
LITAF-221ENST00000622633 LZICQ8WZA0 190 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 CCDC17Q96LX7 622 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 GLT8D2Q9H1C3 349 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 KCNQ5Q9NR82 932 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 DLGAP2Q9P1A6 1054 aa13.37□□□□□ -0.27
LITAF-221ENST00000622633 POLRMTO00411 1230 aaKnown RBP13.37□□□□□ -0.27
LITAF-221ENST00000622633 BACH1O14867 736 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms