RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 DBR1Q9UK59 544 aaKnown RBP23.43■■□□□ 1.34
PMPCA-212ENST00000622209 LZTS1Q9Y250 596 aa23.43■■□□□ 1.34
PMPCA-212ENST00000622209 CLIC4Q9Y696 253 aa23.43■■□□□ 1.34
PMPCA-212ENST00000622209 EOMESO95936 686 aa23.42■■□□□ 1.34
PMPCA-212ENST00000622209 KRT17Q04695 432 aa23.42■■□□□ 1.34
PMPCA-212ENST00000622209 LONRF3Q496Y0 759 aa23.42■■□□□ 1.34
PMPCA-212ENST00000622209 RHPN2Q8IUC4 686 aa23.42■■□□□ 1.34
PMPCA-212ENST00000622209 KSR1Q8IVT5 923 aa23.42■■□□□ 1.34
PMPCA-212ENST00000622209 SNX29Q8TEQ0 813 aa23.42■■□□□ 1.34
PMPCA-212ENST00000622209 AK8Q96MA6 479 aa23.42■■□□□ 1.34
PMPCA-212ENST00000622209 CCDC43Q96MW1 224 aaKnown RBP23.42■■□□□ 1.34
PMPCA-212ENST00000622209 CDCA3Q99618 268 aaPredicted RBP23.42■■□□□ 1.34
PMPCA-212ENST00000622209 DACT1Q9NYF0 836 aa23.42■■□□□ 1.34
PMPCA-212ENST00000622209 SPG21Q9NZD8 308 aa23.42■■□□□ 1.34
PMPCA-212ENST00000622209 KIAA1671Q9BY89 1806 aa23.41■■□□□ 1.34
PMPCA-212ENST00000622209 HIDE1A8MVS5 230 aa23.41■■□□□ 1.34
PMPCA-212ENST00000622209 DGAT1O75907 488 aa23.41■■□□□ 1.34
PMPCA-212ENST00000622209 ATF7P17544 494 aaPredicted RBP23.41■■□□□ 1.34
PMPCA-212ENST00000622209 RARRES1P49788 294 aa23.41■■□□□ 1.34
PMPCA-212ENST00000622209 PTPAQ15257 358 aa23.41■■□□□ 1.34
PMPCA-212ENST00000622209 LLGL2Q6P1M3 1020 aa23.41■■□□□ 1.34
PMPCA-212ENST00000622209 POTEGQ6S5H5 508 aa23.41■■□□□ 1.34
PMPCA-212ENST00000622209 TMC7Q7Z402 723 aa23.41■■□□□ 1.34
PMPCA-212ENST00000622209 TCP11Q8WWU5 503 aa23.41■■□□□ 1.34
PMPCA-212ENST00000622209 ZNF396Q96N95 335 aaPredicted RBP23.41■■□□□ 1.34
PMPCA-212ENST00000622209 MORC2Q9Y6X9 1032 aaPredicted RBP23.41■■□□□ 1.34
PMPCA-212ENST00000622209 PP2D1A8MPX8 630 aa23.4■■□□□ 1.34
PMPCA-212ENST00000622209 F13A1P00488 732 aa23.4■■□□□ 1.34
PMPCA-212ENST00000622209 PPM1AP35813 382 aa23.4■■□□□ 1.34
PMPCA-212ENST00000622209 ECM1Q16610 540 aa23.4■■□□□ 1.34
PMPCA-212ENST00000622209 HERC4Q5GLZ8 1057 aaPredicted RBP23.4■■□□□ 1.34
PMPCA-212ENST00000622209 KCTD17Q8N5Z5 321 aa23.4■■□□□ 1.34
PMPCA-212ENST00000622209 NLRP4Q96MN2 994 aa23.4■■□□□ 1.34
PMPCA-212ENST00000622209 NGRNQ9NPE2 291 aaKnown RBP23.4■■□□□ 1.34
PMPCA-212ENST00000622209 CHST12Q9NRB3 414 aa23.4■■□□□ 1.34
PMPCA-212ENST00000622209 KIAA1024Q9UPX6 916 aa23.4■■□□□ 1.34
PMPCA-212ENST00000622209 A0A087WWV3 80 aa23.39■■□□□ 1.33
PMPCA-212ENST00000622209 NT5C1B-RDH14C9J2C7 533 aa23.39■■□□□ 1.33
PMPCA-212ENST00000622209 SLC26A4O43511 780 aa23.39■■□□□ 1.33
PMPCA-212ENST00000622209 SFPQP23246 707 aaKnown RBP eCLIP23.39■■□□□ 1.33
PMPCA-212ENST00000622209 CDC25AP30304 524 aa23.39■■□□□ 1.33
PMPCA-212ENST00000622209 LONP1P36776 959 aaKnown RBP23.39■■□□□ 1.33
PMPCA-212ENST00000622209 PHKA2P46019 1235 aa23.39■■□□□ 1.33
PMPCA-212ENST00000622209 EMC2Q15006 297 aa23.39■■□□□ 1.33
PMPCA-212ENST00000622209 TWF2Q6IBS0 349 aaKnown RBP23.39■■□□□ 1.33
PMPCA-212ENST00000622209 LPPQ93052 612 aa23.39■■□□□ 1.33
PMPCA-212ENST00000622209 RPGRIP1Q96KN7 1286 aa23.39■■□□□ 1.33
PMPCA-212ENST00000622209 USP28Q96RU2 1077 aa23.39■■□□□ 1.33
PMPCA-212ENST00000622209 MTRQ99707 1265 aa23.39■■□□□ 1.33
PMPCA-212ENST00000622209 MMTAG2Q9BU76 263 aaKnown RBP23.39■■□□□ 1.33
PMPCA-212ENST00000622209 APOL5Q9BWW9 433 aa23.39■■□□□ 1.33
PMPCA-212ENST00000622209 PIN4Q9Y237 131 aaKnown RBP23.39■■□□□ 1.33
PMPCA-212ENST00000622209 LOC730098B7Z3J9 87 aa23.38■■□□□ 1.33
PMPCA-212ENST00000622209 ASAP2O43150 1006 aa23.38■■□□□ 1.33
PMPCA-212ENST00000622209 PKP1Q13835 747 aa23.38■■□□□ 1.33
PMPCA-212ENST00000622209 SLC39A14Q15043 492 aa23.38■■□□□ 1.33
PMPCA-212ENST00000622209 HYIQ5T013 277 aa23.38■■□□□ 1.33
PMPCA-212ENST00000622209 FOXD4L5Q5VV16 416 aaPredicted RBP23.38■■□□□ 1.33
PMPCA-212ENST00000622209 CATSPER4Q7RTX7 472 aa23.38■■□□□ 1.33
PMPCA-212ENST00000622209 ZNF410Q86VK4 478 aa23.38■■□□□ 1.33
PMPCA-212ENST00000622209 SLC39A11Q8N1S5 342 aa23.38■■□□□ 1.33
PMPCA-212ENST00000622209 PSPC1Q8WXF1 523 aaKnown RBP23.38■■□□□ 1.33
PMPCA-212ENST00000622209 FOXD4L4Q8WXT5 416 aaPredicted RBP23.38■■□□□ 1.33
PMPCA-212ENST00000622209 PHF7Q9BWX1 381 aaPredicted RBP23.38■■□□□ 1.33
PMPCA-212ENST00000622209 INO80BQ9C086 356 aaPredicted RBP23.38■■□□□ 1.33
PMPCA-212ENST00000622209 DDX19AQ9NUU7 478 aaKnown RBP23.38■■□□□ 1.33
PMPCA-212ENST00000622209 DNM3Q9UQ16 869 aa23.38■■□□□ 1.33
PMPCA-212ENST00000622209 SRPRBQ9Y5M8 271 aaKnown RBP23.38■■□□□ 1.33
PMPCA-212ENST00000622209 FNDC1Q4ZHG4 1894 aaPredicted RBP23.38■■□□□ 1.33
PMPCA-212ENST00000622209 TRIOO75962 3097 aa23.37■■□□□ 1.33
PMPCA-212ENST00000622209 FSD2A1L4K1 749 aa23.37■■□□□ 1.33
PMPCA-212ENST00000622209 ARHGEF35A5YM69 484 aa23.37■■□□□ 1.33
PMPCA-212ENST00000622209 SRGAP2BP0DMP2 458 aa23.37■■□□□ 1.33
PMPCA-212ENST00000622209 NASPP49321 788 aaPredicted RBP23.37■■□□□ 1.33
PMPCA-212ENST00000622209 ALDH7A1P49419 539 aaKnown RBP23.37■■□□□ 1.33
PMPCA-212ENST00000622209 BCAR1P56945 870 aa23.37■■□□□ 1.33
PMPCA-212ENST00000622209 CEBPZQ03701 1054 aaKnown RBP23.37■■□□□ 1.33
PMPCA-212ENST00000622209 ATL3Q6DD88 541 aa23.37■■□□□ 1.33
PMPCA-212ENST00000622209 ANKRD54Q6NXT1 300 aa23.37■■□□□ 1.33
PMPCA-212ENST00000622209 HFE2Q6ZVN8 426 aa23.37■■□□□ 1.33
PMPCA-212ENST00000622209 PRPF31Q8WWY3 499 aaKnown RBP23.37■■□□□ 1.33
PMPCA-212ENST00000622209 TMEM143Q96AN5 459 aa23.37■■□□□ 1.33
PMPCA-212ENST00000622209 MRPL9Q9BYD2 267 aaKnown RBP23.37■■□□□ 1.33
PMPCA-212ENST00000622209 NT5C3AQ9H0P0 336 aa23.37■■□□□ 1.33
PMPCA-212ENST00000622209 PLXNA4Q9HCM2 1894 aa23.36■■□□□ 1.33
PMPCA-212ENST00000622209 CA8P35219 290 aa23.36■■□□□ 1.33
PMPCA-212ENST00000622209 KCNC3Q14003 757 aa23.36■■□□□ 1.33
PMPCA-212ENST00000622209 TMEM184AQ6ZMB5 413 aa23.36■■□□□ 1.33
PMPCA-212ENST00000622209 CABP7Q86V35 215 aa23.36■■□□□ 1.33
PMPCA-212ENST00000622209 SUSD6Q92537 303 aa23.36■■□□□ 1.33
PMPCA-212ENST00000622209 EDAQ92838 391 aa23.36■■□□□ 1.33
PMPCA-212ENST00000622209 S1PR5Q9H228 398 aa23.36■■□□□ 1.33
PMPCA-212ENST00000622209 XPNPEP1Q9NQW7 623 aa23.36■■□□□ 1.33
PMPCA-212ENST00000622209 BMP2KQ9NSY1 1161 aaPredicted RBP23.36■■□□□ 1.33
PMPCA-212ENST00000622209 INPP5FQ9Y2H2 1132 aa23.36■■□□□ 1.33
PMPCA-212ENST00000622209 COL4A3BPQ9Y5P4 624 aa23.36■■□□□ 1.33
PMPCA-212ENST00000622209 ARID2Q68CP9 1835 aa23.36■■□□□ 1.33
PMPCA-212ENST00000622209 MEIS3P2A8K0S8 358 aa23.35■■□□□ 1.33
PMPCA-212ENST00000622209 BRD1O95696 1058 aa23.35■■□□□ 1.33
PMPCA-212ENST00000622209 SRGAP2CP0DJJ0 459 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms