RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 UBE2Q2LH0YL09 131 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 ZNF189O75820 626 aaPredicted RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 AFPP02771 609 aaKnown RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 PCYT1AP49585 367 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 CXCL9Q07325 125 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 NECTIN1Q15223 517 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 LRIG3Q6UXM1 1119 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 KCNV2Q8TDN2 545 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 SOCS4Q8WXH5 440 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 LZICQ8WZA0 190 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 DRC3Q9H069 523 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 RRAGCQ9HB90 399 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 JPH1Q9HDC5 661 aaPredicted RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 SLC39A2Q9NP94 309 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 FARP1Q9Y4F1 1045 aaPredicted RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 GSG1L2A8MUP6 293 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 IPO5O00410 1097 aaKnown RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 NKRFO15226 690 aaKnown RBP eCLIP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 GMNNO75496 209 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 ARL4AP40617 200 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 MAGOHP61326 146 aaKnown RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 KIF23Q02241 960 aaPredicted RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 MXD4Q14582 209 aaPredicted RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 ZNF568Q3ZCX4 644 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 RDM1Q8NG50 284 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 STAMQ92783 540 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 MAGOHBQ96A72 148 aaKnown RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 NUDCD1Q96RS6 583 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 DDX50Q9BQ39 737 aaKnown RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 PCDHA13Q9Y5I0 950 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 GRID2IPA4D2P6 1211 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 HNRNPCL1O60812 293 aaKnown RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 NDUFB10O96000 172 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 NAA35Q5VZE5 725 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 C16orf86Q6ZW13 317 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 TRIM42Q8IWZ5 723 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 ANKRD13CQ8N6S4 541 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 TEKT4Q8WW24 435 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 RSAD2Q8WXG1 361 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 SLC38A10Q9HBR0 1119 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 PAPOLBQ9NRJ5 636 aaKnown RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 TTLL3Q9Y4R7 772 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 MOCS3O95396 460 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 ZNF543Q08ER8 600 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 NOGQ13253 232 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 DGKDQ16760 1214 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 PTPN21Q16825 1174 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 CEP55Q53EZ4 464 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 RASGRP4Q8TDF6 673 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 U2AF1L4Q8WU68 220 aaKnown RBP11.16□□□□□ -0.62
COL25A1-209ENST00000622134 MAP3K14Q99558 947 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 ETNK1Q9HBU6 452 aa11.16□□□□□ -0.62
COL25A1-209ENST00000622134 SPDYE16A6NNV3 312 aaPredicted RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 GAS2O43903 313 aaKnown RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 GSTA2P09210 222 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 PPARGP37231 505 aaPredicted RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 LMNB2Q03252 620 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 LRRC63Q05C16 580 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 SPDYE2Q495Y8 402 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 CHADLQ6NUI6 762 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 BZW1Q7L1Q6 419 aaKnown RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 USP6NLQ92738 828 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 CYFIP2Q96F07 1278 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 SEC16BQ96JE7 1060 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 PITPNM3Q9BZ71 974 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 THAP9Q9H5L6 903 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 EMILIN3Q9NT22 766 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 BARHL2Q9NY43 387 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 GABBR1Q9UBS5 961 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 POLIQ9UNA4 740 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 SPDYE2BA6NHP3 402 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 TTC36A6NLP5 189 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 H0Y3Z8 333 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 SPDYE6P0CI01 402 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 CXCR5P32302 372 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 RFC5P40937 340 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 CTCFP49711 727 aaPredicted RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 PADI6Q6TGC4 694 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 MFN1Q8IWA4 741 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 GSPT2Q8IYD1 628 aaKnown RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 ADGRF4Q8IZF3 695 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 ENAHQ8N8S7 591 aaPredicted RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 FHDC1Q9C0D6 1143 aaPredicted RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 IQGAP1P46940 1657 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 ESYT2A0FGR8 921 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 TBX3O15119 743 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 GGPS1O95749 300 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 ESRRAP11474 423 aaPredicted RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 PTGISQ16647 500 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 UHMK1Q8TAS1 419 aaKnown RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 ZC3H15Q8WU90 426 aaKnown RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 ATP2A3Q93084 1043 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 P2RX5Q93086 422 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 MRRFQ96E11 262 aaKnown RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 DYDC2Q96IM9 177 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 BHMT2Q9H2M3 363 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 PFDN4Q9NQP4 134 aa11.15□□□□□ -0.62
COL25A1-209ENST00000622134 SRPRBQ9Y5M8 271 aaKnown RBP11.15□□□□□ -0.62
COL25A1-209ENST00000622134 SPECC1L-ADORA2AF8WAN1 911 aa11.15□□□□□ -0.63
COL25A1-209ENST00000622134 STRNO43815 780 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms