RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 ELF3P78545 371 aaPredicted RBP17■□□□□ 0.31
NPHP4-211ENST00000622020 DRP2Q13474 957 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 PREPLQ4J6C6 727 aaPredicted RBP17■□□□□ 0.31
NPHP4-211ENST00000622020 LRCH2Q5VUJ6 765 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 CCDC174Q6PII3 467 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 C1orf54Q8WWF1 131 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 NAP1L4Q99733 375 aaKnown RBP17■□□□□ 0.31
NPHP4-211ENST00000622020 AGPAT1Q99943 283 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 TXLNGYQ9BZA5 131 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 CNOT10Q9H9A5 744 aaKnown RBP17■□□□□ 0.31
NPHP4-211ENST00000622020 AGPAT3Q9NRZ7 376 aa17■□□□□ 0.31
NPHP4-211ENST00000622020 ANKRD62A6NC57 917 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 SLC16A3O15427 465 aaKnown RBP16.99■□□□□ 0.31
NPHP4-211ENST00000622020 PAEPP09466 180 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 TNIP1Q15025 636 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 SIAH1Q8IUQ4 282 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 FAM84AQ96KN4 292 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.99■□□□□ 0.314e-6■■■■■ 28.1
NPHP4-211ENST00000622020 AGAP1Q9UPQ3 857 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 UTRNP46939 3433 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 EMSYQ7Z589 1322 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 GOLGA8IPA6NC78 632 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 GOLGA8JA6NMD2 632 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 RASGRF2O14827 1237 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 SPOPO43791 374 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 DLATP10515 647 aaKnown RBP16.99■□□□□ 0.31
NPHP4-211ENST00000622020 NPEPPSP55786 919 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 C2CD6Q53TS8 623 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 APOBEC3HQ6NTF7 200 aaKnown RBP16.99■□□□□ 0.31
NPHP4-211ENST00000622020 CCDC63Q8NA47 563 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 WDR18Q9BV38 432 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 FGFR1OP2Q9NVK5 253 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 RASAL2Q9UJF2 1139 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 STK38LQ9Y2H1 464 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 SBF2Q86WG5 1849 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 SGPL1O95470 568 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 ELF1P32519 619 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 KCNJ2P63252 427 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 ZYXQ15942 572 aaKnown RBP16.99■□□□□ 0.31
NPHP4-211ENST00000622020 DAB2IPQ5VWQ8 1189 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 NOD2Q9HC29 1040 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 INTUQ9ULD6 942 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 TRPC6Q9Y210 931 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 PLIN4Q96Q06 1357 aa16.99■□□□□ 0.31
NPHP4-211ENST00000622020 ARFGEF1Q9Y6D6 1849 aa16.98■□□□□ 0.31
NPHP4-211ENST00000622020 PPIP5K2O43314 1243 aa16.98■□□□□ 0.31
NPHP4-211ENST00000622020 NDUFB10O96000 172 aa16.98■□□□□ 0.31
NPHP4-211ENST00000622020 EZRP15311 586 aaKnown RBP16.98■□□□□ 0.31
NPHP4-211ENST00000622020 HOXA7P31268 230 aaPredicted RBP16.98■□□□□ 0.31
NPHP4-211ENST00000622020 PTGIRP43119 386 aa16.98■□□□□ 0.31
NPHP4-211ENST00000622020 MMP13P45452 471 aa16.98■□□□□ 0.31
NPHP4-211ENST00000622020 JAG1P78504 1218 aa16.98■□□□□ 0.31
NPHP4-211ENST00000622020 ZNF720Q7Z2F6 126 aa16.98■□□□□ 0.31
NPHP4-211ENST00000622020 PRCCQ92733 491 aaPredicted RBP16.98■□□□□ 0.31
NPHP4-211ENST00000622020 STAMBPL1Q96FJ0 436 aa16.98■□□□□ 0.31
NPHP4-211ENST00000622020 NAP1L3Q99457 506 aaPredicted RBP16.98■□□□□ 0.31
NPHP4-211ENST00000622020 MCM8Q9UJA3 840 aa16.98■□□□□ 0.31
NPHP4-211ENST00000622020 EIF4E1BA6NMX2 242 aaKnown RBP16.98■□□□□ 0.31
NPHP4-211ENST00000622020 C1orf186Q6ZWK4 172 aa16.98■□□□□ 0.31
NPHP4-211ENST00000622020 CRYGNQ8WXF5 182 aa16.98■□□□□ 0.31
NPHP4-211ENST00000622020 ATG4AQ8WYN0 398 aa16.98■□□□□ 0.31
NPHP4-211ENST00000622020 TCP11X1B4DZS4 312 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 PHF2O75151 1096 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 ATP6V1G2O95670 118 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 PPP3CAQ08209 521 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 AP3B2Q13367 1082 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 EPC2Q52LR7 807 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 C15orf52Q6ZUT6 534 aaKnown RBP16.97■□□□□ 0.31
NPHP4-211ENST00000622020 UBL4BQ8N7F7 174 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 PCDHB18PQ96TA0 734 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 LRRC4BQ9NT99 713 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 MTRF1LQ9UGC7 380 aaKnown RBP16.97■□□□□ 0.31
NPHP4-211ENST00000622020 SRRM3A6NNA2 597 aaPredicted RBP16.97■□□□□ 0.31
NPHP4-211ENST00000622020 UBOX5O94941 541 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 GBP2P32456 591 aaPredicted RBP16.97■□□□□ 0.31
NPHP4-211ENST00000622020 SREBF1P36956 1147 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 MYO1EQ12965 1108 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 XRCC4Q13426 336 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 BMT2Q1RMZ1 405 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 Q4G0T1 1027 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 SEL1L2Q5TEA6 688 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 NUGGCQ68CJ6 796 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 TRPM8Q7Z2W7 1104 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 PPM1KQ8N3J5 372 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 TEKT1Q969V4 418 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 FAM20AQ96MK3 541 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 MBOAT7Q96N66 472 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 CBWD1Q9BRT8 395 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 ADAM33Q9BZ11 813 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 KDM4CQ9H3R0 1056 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 TRIM33Q9UPN9 1127 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 NCANO14594 1321 aa16.97■□□□□ 0.31
NPHP4-211ENST00000622020 TMEM150BA6NC51 233 aa16.96■□□□□ 0.31
NPHP4-211ENST00000622020 A8MUI8 341 aa16.96■□□□□ 0.31
NPHP4-211ENST00000622020 CLDN3O15551 220 aa16.96■□□□□ 0.31
NPHP4-211ENST00000622020 CYP26A1O43174 497 aa16.96■□□□□ 0.31
NPHP4-211ENST00000622020 RIPK2O43353 540 aa16.96■□□□□ 0.31
NPHP4-211ENST00000622020 SKAP2O75563 359 aaPredicted RBP16.96■□□□□ 0.31
NPHP4-211ENST00000622020 GH1P01241 217 aa16.96■□□□□ 0.31
NPHP4-211ENST00000622020 BFSP1Q12934 665 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms