RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 P4HA1P13674 534 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 DNAJC19Q96DA6 116 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 CBWD1Q9BRT8 395 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 UBE2TQ9NPD8 197 aaPredicted RBP13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 AGPAT3Q9NRZ7 376 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 HDAC6Q9UBN7 1215 aa13.58□□□□□ -0.24
SCAMP1-207ENST00000621999 EIF3DO15371 548 aaKnown RBP eCLIP13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 SMIM10L2AP0DMW4 78 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 SMIM10L2BP0DMW5 78 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 SCARA5Q6ZMJ2 495 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 RBM43Q6ZSC3 357 aaKnown RBP13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 KIAA1551Q9HCM1 1747 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 PHLPP2Q6ZVD8 1323 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 CCDC175P0C221 793 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 DESP17661 470 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 CD58P19256 250 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 SARSP49591 514 aaKnown RBP13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 RBL2Q08999 1139 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 SNRNP35Q16560 246 aaKnown RBP13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 ARSHQ5FYA8 562 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 SEMA6BQ9H3T3 888 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 GUCA1BQ9UMX6 200 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 RGS20O76081 388 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 CASP5P51878 434 aa13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 WRAP73Q9P2S5 460 aaPredicted RBP13.57□□□□□ -0.24
SCAMP1-207ENST00000621999 EMSYQ7Z589 1322 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 DCDC2CA8MYV0 355 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 ASGR1P07306 291 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 KIF5AQ12840 1032 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 TAF3Q5VWG9 929 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 OLFML2BQ68BL8 750 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 ZNF467Q7Z7K2 595 aaPredicted RBP13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 SLAIN1Q8ND83 568 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 CPB2Q96IY4 423 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 ACAP3Q96P50 834 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 OLFML3Q9NRN5 406 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 LAMB1P07942 1786 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 CASP4P49662 377 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 PMS1P54277 932 aaKnown RBP13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 GNG11P61952 73 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 PTGISQ16647 500 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 NBPF20Q3BBV1 942 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 CYP26C1Q6V0L0 522 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 UPP2O95045 317 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 ATF7P17544 494 aaPredicted RBP13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 GPC3P51654 580 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 TNNC1P63316 161 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 KRT83P78385 493 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 SPIRE1Q08AE8 756 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 SURF1Q15526 300 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 KCNA10Q16322 511 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 EDRF1Q3B7T1 1238 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 TMEM63BQ5T3F8 832 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 FAM117BQ6P1L5 589 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 ASAP3Q8TDY4 903 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 TAF4BQ92750 862 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 NRCAMQ92823 1304 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 LGALS16A8MUM7 142 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 PPP1R12CQ9BZL4 782 aa13.56□□□□□ -0.24
SCAMP1-207ENST00000621999 ARHGAP1Q07960 439 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 CACNB2Q08289 660 aaPredicted RBP13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 HYIQ5T013 277 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 CCDC181Q5TID7 509 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 KIF12Q96FN5 646 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 CDK5RAP2Q96SN8 1893 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 TISP43B9A030 160 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 NOLC1Q14978 699 aaKnown RBP eCLIP13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 CCDC155Q8N6L0 562 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 TRIB2Q92519 343 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 ZBED2Q9BTP6 218 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 ST7Q9NRC1 585 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 LTBP1Q14766 1721 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 KLRC4O43908 158 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 NPTXRO95502 500 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 BMP6P22004 513 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 GLRA2P23416 452 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 ZNF394Q53GI3 561 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 CBWD2Q8IUF1 395 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 VSTM4Q8IW00 320 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 PDE11AQ9HCR9 933 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 PCDHB4Q9Y5E5 795 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 PTCH2Q9Y6C5 1203 aa13.55□□□□□ -0.24
SCAMP1-207ENST00000621999 GHRP10912 638 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 PAK2Q13177 524 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 TMTC1Q8IUR5 882 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 FMNL3Q8IVF7 1028 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 C17orf53Q8N3J3 647 aaPredicted RBP13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 CGNQ9P2M7 1197 aaKnown RBP13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 RASSF10A6NK89 507 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 TMEM110-MUSTN1A8MSY1 372 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 MAFO75444 373 aaPredicted RBP13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 CCND3P30281 292 aaPredicted RBP13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 MFAP3P55082 362 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 CENPPQ6IPU0 288 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 HHIPL1Q96JK4 782 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 KLK14Q9P0G3 267 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 ZKSCAN5Q9Y2L8 839 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 TELO2Q9Y4R8 837 aa13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 URI1O94763 535 aaPredicted RBP13.54□□□□□ -0.24
SCAMP1-207ENST00000621999 LYPLA2O95372 231 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms