RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ACCSQ96QU6 501 aa11.46□□□□□ -0.58
VPS11-208ENST00000621676 MSTO1Q9BUK6 570 aa11.46□□□□□ -0.58
VPS11-208ENST00000621676 TAS2R14Q9NYV8 317 aa11.46□□□□□ -0.58
VPS11-208ENST00000621676 GABRQQ9UN88 632 aa11.46□□□□□ -0.58
VPS11-208ENST00000621676 ADAMTS5Q9UNA0 930 aa11.46□□□□□ -0.58
VPS11-208ENST00000621676 RPTORQ8N122 1335 aa11.46□□□□□ -0.58
VPS11-208ENST00000621676 MYH15Q9Y2K3 1946 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 CYP26A1O43174 497 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 NOL4O94818 638 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 SMPD1P17405 629 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 HOXA7P31268 230 aaPredicted RBP11.45□□□□□ -0.58
VPS11-208ENST00000621676 PBX1P40424 430 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 VAMP7P51809 220 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 MYL7Q01449 175 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 SH3D19Q5HYK7 790 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 NOL9Q5SY16 702 aaKnown RBP11.45□□□□□ -0.58
VPS11-208ENST00000621676 HYIQ5T013 277 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 XXYLT1Q8NBI6 393 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 MS4A14Q96JA4 679 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 CXCL16Q9H2A7 254 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 CDHR5Q9HBB8 845 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 PNMA3Q9UL41 463 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 LRRC10BA6NIK2 292 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 ITGBL1O95965 494 aaPredicted RBP11.45□□□□□ -0.58
VPS11-208ENST00000621676 WEE2P0C1S8 567 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 PSMC4P43686 418 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 GNASQ5JWF2 1037 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 EEF1DP3Q658K8 133 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 IQCEQ6IPM2 695 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 C4orf19Q8IY42 314 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 OSMRQ99650 979 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 SIK3Q9Y2K2 1263 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 CAPN6Q9Y6Q1 641 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 H3BRB1 525 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 SNAI1O95863 264 aaPredicted RBP11.45□□□□□ -0.58
VPS11-208ENST00000621676 NEDD9Q14511 834 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 PHLDB3Q6NSJ2 640 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 GBP6Q6ZN66 633 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 SEMA4DQ92854 862 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 TUT1Q9H6E5 874 aaKnown RBP11.45□□□□□ -0.58
VPS11-208ENST00000621676 NRBP2Q9NSY0 501 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 ZMYM2Q9UBW7 1377 aa11.45□□□□□ -0.58
VPS11-208ENST00000621676 PDXKO00764 312 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 CLDN3O15551 220 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 ATP1A1P05023 1023 aaKnown RBP11.44□□□□□ -0.58
VPS11-208ENST00000621676 SFNP31947 248 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 FMO5P49326 533 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 ZBED6P86452 979 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 CAP1Q01518 475 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 KIF5AQ12840 1032 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 CAPSQ13938 189 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 ASIC2Q16515 512 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 METTL7BQ6UX53 244 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 CPNE8Q86YQ8 564 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 GPR20Q99678 358 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 CAPN11Q9UMQ6 739 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 FRMPD4Q14CM0 1322 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 MXI1P50539 228 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 BFSP1Q12934 665 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 ORC2Q13416 577 aaPredicted RBP11.44□□□□□ -0.58
VPS11-208ENST00000621676 PAN2Q504Q3 1202 aaKnown RBP11.44□□□□□ -0.58
VPS11-208ENST00000621676 MCTP2Q6DN12 878 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 CHADLQ6NUI6 762 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 SLC39A4Q6P5W5 647 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 STXBP4Q6ZWJ1 553 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 TMTC1Q8IUR5 882 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 ELOA2Q8IYF1 753 aaPredicted RBP11.44□□□□□ -0.58
VPS11-208ENST00000621676 OR5B17Q8NGF7 314 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 KCNH4Q9UQ05 1017 aa11.44□□□□□ -0.58
VPS11-208ENST00000621676 DGAT1O75907 488 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 SEC31AO94979 1220 aaKnown RBP11.43□□□□□ -0.58
VPS11-208ENST00000621676 IQCF3P0C7M6 154 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 AKAP5P24588 427 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 CDH8P55286 799 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 TNFAIP2Q03169 654 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 RGMBQ6NW40 437 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 TRIM65Q6PJ69 517 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 PLEKHH3Q7Z736 793 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 GSPT2Q8IYD1 628 aaKnown RBP11.43□□□□□ -0.58
VPS11-208ENST00000621676 UMODL1Q5DID0 1318 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 BCRP11274 1271 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 CTGFP29279 349 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 RAP1GAPP47736 663 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 LAMTOR4Q0VGL1 99 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 ACVR2BQ13705 512 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 CELF3Q5SZQ8 465 aaKnown RBP11.43□□□□□ -0.58
VPS11-208ENST00000621676 NFRKBQ6P4R8 1299 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 TTC16Q8NEE8 873 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 SCFD2Q8WU76 684 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 DNAJB3Q8WWF6 145 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 CDHR1Q96JP9 859 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 TINF2Q9BSI4 451 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 HAPLN2Q9GZV7 340 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 OSGEPQ9NPF4 335 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 AGO2Q9UKV8 859 aaKnown RBP11.43□□□□□ -0.58
VPS11-208ENST00000621676 MYADML2A6NDP7 307 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 EVI5O60447 810 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 LGALS2P05162 132 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 GAP43P17677 238 aa11.43□□□□□ -0.58
VPS11-208ENST00000621676 FLT3LGP49771 235 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms