RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 RPGRIP1Q96KN7 1286 aa12.81□□□□□ -0.36
CPNE3-210ENST00000621245 DHX33Q9H6R0 707 aaKnown RBP12.81□□□□□ -0.36
CPNE3-210ENST00000621245 XPNPEP1Q9NQW7 623 aa12.81□□□□□ -0.36
CPNE3-210ENST00000621245 TBC1D13Q9NVG8 400 aa12.81□□□□□ -0.36
CPNE3-210ENST00000621245 SPG21Q9NZD8 308 aa12.81□□□□□ -0.36
CPNE3-210ENST00000621245 LZTS1Q9Y250 596 aa12.81□□□□□ -0.36
CPNE3-210ENST00000621245 COL4A3BPQ9Y5P4 624 aa12.81□□□□□ -0.36
CPNE3-210ENST00000621245 TRIP11Q15643 1979 aa12.81□□□□□ -0.36
CPNE3-210ENST00000621245 C2orf71A6NGG8 1288 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 HOXA2O43364 376 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 ZC3H11AO75152 810 aaKnown RBP eCLIP12.8□□□□□ -0.36
CPNE3-210ENST00000621245 CDKL5O76039 1030 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 EOMESO95936 686 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 WEE2P0C1S8 567 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 SRGAP2CP0DJJ0 459 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 SFPQP23246 707 aaKnown RBP eCLIP12.8□□□□□ -0.36
CPNE3-210ENST00000621245 CBX2Q14781 532 aaPredicted RBP12.8□□□□□ -0.36
CPNE3-210ENST00000621245 EMC2Q15006 297 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 CSPP1Q1MSJ5 1256 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 AGMOQ6ZNB7 445 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 CATSPER4Q7RTX7 472 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 ZNF410Q86VK4 478 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 ZNF280BQ86YH2 543 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 FAM177A1Q8N128 213 aaPredicted RBP12.8□□□□□ -0.36
CPNE3-210ENST00000621245 CEP170P1Q96L14 293 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 FAM20AQ96MK3 541 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 POP1Q99575 1024 aaKnown RBP12.8□□□□□ -0.36
CPNE3-210ENST00000621245 NRDE2Q9H7Z3 1164 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 AGPAT5Q9NUQ2 364 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 FAM105AQ9NUU6 356 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 HCFC2Q9Y5Z7 792 aa12.8□□□□□ -0.36
CPNE3-210ENST00000621245 DOCK6Q96HP0 2047 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 CLASP2O75122 1294 aaKnown RBP12.79□□□□□ -0.36
CPNE3-210ENST00000621245 OFD1O75665 1012 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 DDHD2O94830 711 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 P4HBP07237 508 aaKnown RBP12.79□□□□□ -0.36
CPNE3-210ENST00000621245 GCFC2P16383 781 aaKnown RBP12.79□□□□□ -0.36
CPNE3-210ENST00000621245 HOXA11P31270 313 aaPredicted RBP12.79□□□□□ -0.36
CPNE3-210ENST00000621245 YWHABP31946 246 aaKnown RBP12.79□□□□□ -0.36
CPNE3-210ENST00000621245 PPM1AP35813 382 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 KRT2P35908 639 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 SLC11A1P49279 550 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 DNM2P50570 870 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 POLGP54098 1239 aaPredicted RBP12.79□□□□□ -0.36
CPNE3-210ENST00000621245 LAMTOR4Q0VGL1 99 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 EPHA7Q15375 998 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 TMEM184AQ6ZMB5 413 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 TMC7Q7Z402 723 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 PARP9Q8IXQ6 854 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 C12orf76Q8N812 135 aaPredicted RBP12.79□□□□□ -0.36
CPNE3-210ENST00000621245 ASAP3Q8TDY4 903 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 TRAIPQ9BWF2 469 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 PHF7Q9BWX1 381 aaPredicted RBP12.79□□□□□ -0.36
CPNE3-210ENST00000621245 GBP3Q9H0R5 595 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 ZBP1Q9H171 429 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 SMOC2Q9H3U7 446 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 CHST12Q9NRB3 414 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 DACT1Q9NYF0 836 aa12.79□□□□□ -0.36
CPNE3-210ENST00000621245 FRYLO94915 3013 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 MTCL1Q9Y4B5 1905 aaKnown RBP12.78□□□□□ -0.36
CPNE3-210ENST00000621245 BTBD18B2RXH4 712 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 F8W810 466 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 SLITRK3O94933 977 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 GALTP07902 379 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 EPCAMP16422 314 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 CA8P35219 290 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 ANAPC15P60006 121 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 GUCY1B3Q02153 619 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 SMC1AQ14683 1233 aaKnown RBP12.78□□□□□ -0.36
CPNE3-210ENST00000621245 XKR9Q5GH70 373 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 NOMO2Q5JPE7 1267 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 PDE12Q6L8Q7 609 aaKnown RBP12.78□□□□□ -0.36
CPNE3-210ENST00000621245 FAM43BQ6ZT52 329 aaPredicted RBP12.78□□□□□ -0.36
CPNE3-210ENST00000621245 C4orf19Q8IY42 314 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 ZNF710Q8N1W2 664 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 MRPL43Q8N983 215 aaKnown RBP12.78□□□□□ -0.36
CPNE3-210ENST00000621245 SMG8Q8ND04 991 aaKnown RBP12.78□□□□□ -0.36
CPNE3-210ENST00000621245 CPB2Q96IY4 423 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 CDCA3Q99618 268 aaPredicted RBP12.78□□□□□ -0.36
CPNE3-210ENST00000621245 EIF2AK1Q9BQI3 630 aaKnown RBP12.78□□□□□ -0.36
CPNE3-210ENST00000621245 EIF2AQ9BY44 585 aaKnown RBP12.78□□□□□ -0.36
CPNE3-210ENST00000621245 TMEM60Q9H2L4 133 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 POMKQ9H5K3 350 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 NGRNQ9NPE2 291 aaKnown RBP12.78□□□□□ -0.36
CPNE3-210ENST00000621245 PCDHB2Q9Y5E7 798 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 VWA8A3KMH1 1905 aa12.78□□□□□ -0.36
CPNE3-210ENST00000621245 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.77□□□□□ -0.37
CPNE3-210ENST00000621245 POTEMA6NI47 508 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 TBX3O15119 743 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 TSPAN1O60635 241 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 NEFLP07196 543 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 CAPSQ13938 189 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 FERMT3Q86UX7 667 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 TPH2Q8IWU9 490 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 DIS3L2Q8IYB7 885 aaKnown RBP12.77□□□□□ -0.37
CPNE3-210ENST00000621245 VPS52Q8N1B4 723 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 RNF149Q8NC42 400 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 PSPC1Q8WXF1 523 aaKnown RBP12.77□□□□□ -0.37
CPNE3-210ENST00000621245 SLC7A3Q8WY07 619 aa12.77□□□□□ -0.37
CPNE3-210ENST00000621245 EDAQ92838 391 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms